Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00661 ATGGCTTCTTCTTCAGTCTTCTCCGTAGCTTCACACACTGCTTCACTTTCAAAACACGATACCAACATCAAGGGTAAGCTCAATTTTAGAACCAACACTTTCAGATTTAACAAGGAAGGAACCAACACTTGCTCCAATTTCAGGTCTTCTGGACGGATCACTATGGCTGTTGCGGTTAATGTTTCTCGGTTTGAGGGTATACCGATGGCTCCTCCTGATCCAATTCTTGGTGTTTCTGAAGCATTTAAAGCAGACACGAGCGATGTCAAGCTCAATCTTGGAGTTGGGGCTTATAGAACGGAAGAACTACAGCCATACGTGCTTAATGTTGTTAACAAGGCAGAGAATCTTATGTTGAAGAGAGGAGAAAACAAAGAGTATCTCCCAATTGAAGGTTTGGCTGCATTTAATAAGGCAACTGCAGAGCTGTTACTCGGAGCAGACAATCCAGCAATCAAACAGCAAAGAGTTGCCACTGTCCAAGGTCTTTCAGGAACCGGTTCTCTGCGACTAGGTGCAGCTCTGATACAACGATATTTTCCTGGGGCAAAAGTTGTGATATCAAATCCTACATGGGGTAATCACAAGAATATTTTCAATGATGCTGGAGTACCATGGTCCGAGTACCGATACTATGACCCTAAAACAGTTGGGTTGGATTTTGAGGGCATGATAGAAGATATAAAGTCAGCTCCCGAAGGAACTTTTGTGCTACTTCATGGATGTGCTCATAATCCTACCGGTATTGATCCAACACCAGAACAATGGGAAAAAATAGCCGATTTAATTCAACAAAAGAACCACATTCCATTTTTTGATGTTGCTTACCAGggttttgctagtggAAGCCTTGATGAAGATGCAGCATCTGTGAGATTGTTTGTGGCACGTGGCATGGAGGTTCTTGTAGCTCAGTCATACAGTAAAAATCTGGGTCTTTATGCTGAAAGGGTTGGAGCTATCAATGTCATTTCCTCATCACCAGAATCTGCAACAAGGGTAAAGAGCCAATTGAAAAGGCTTGCCCGACCAATGTACTCTAATCCACCTGTTCACGGGGCTAGGATTGTTGCTAATATTGTTGGGGATCCAACTCTCTTCGGTGAATGGAAAGCAGAAATGGAAATGATGGCTGGAAGGATCAAAACTGTTAGACAGAAGCTATATGATAGTATTTCTTCAAAAGACAAGAGTGGAAAGGATTGGTCGTTCATACTTAAGCAGATAGGCATGTTCTCATTCACCGGCTTGAATAAGAACCAGAGTGACAATATGACGAATAAGTGGCATATATACATGACAAAGGATGGAAGGATTTCCCTGGCAGGATTGTCGCTGGCCAAATGTGAATACCTTGCAGATGCTATTATTGATTCGTATCACAATGTCAGCTGA 1395 0.4201 MASSSVFSVASHTASLSKHDTNIKGKLNFRTNTFRFNKEGTNTCSNFRSSGRITMAVAVNVSRFEGIPMAPPDPILGVSEAFKADTSDVKLNLGVGAYRTEELQPYVLNVVNKAENLMLKRGENKEYLPIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIQRYFPGAKVVISNPTWGNHKNIFNDAGVPWSEYRYYDPKTVGLDFEGMIEDIKSAPEGTFVLLHGCAHNPTGIDPTPEQWEKIADLIQQKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGMEVLVAQSYSKNLGLYAERVGAINVISSSPESATRVKSQLKRLARPMYSNPPVHGARIVANIVGDPTLFGEWKAEMEMMAGRIKTVRQKLYDSISSKDKSGKDWSFILKQIGMFSFTGLNKNQSDNMTNKWHIYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00661 464 PANTHER ASPARTATE AMINOTRANSFERASE, CYTOPLASMIC 11 462 - -
Tsu01g00661 464 SUPERFAMILY PLP-dependent transferases 62 458 IPR015424 -
Tsu01g00661 464 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 306 319 IPR004838 GO:0003824|GO:0009058|GO:0030170
Tsu01g00661 464 PRINTS Aspartate aminotransferase signature 237 256 IPR000796 GO:0006520|GO:0008483
Tsu01g00661 464 PRINTS Aspartate aminotransferase signature 268 280 IPR000796 GO:0006520|GO:0008483
Tsu01g00661 464 PRINTS Aspartate aminotransferase signature 405 423 IPR000796 GO:0006520|GO:0008483
Tsu01g00661 464 PRINTS Aspartate aminotransferase signature 336 361 IPR000796 GO:0006520|GO:0008483
Tsu01g00661 464 Gene3D Aspartate Aminotransferase, domain 1 67 456 IPR015422 GO:0003824
Tsu01g00661 464 CDD AAT_like 91 456 - -
Tsu01g00661 464 PANTHER ASPARTATE AMINOTRANSFERASE 11 462 IPR000796 GO:0006520|GO:0008483
Tsu01g00661 464 Pfam Aminotransferase class I and II 90 456 IPR004839 GO:0009058|GO:0030170
Tsu01g00661 464 Gene3D - 122 363 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00661 Tsu-Chr1 5833557 5837403 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00661 K00811 - gmx:547792 811.601