Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00659 ATGCTATGTAAACTTGTTCCTTTGTCACGGAAGAAAAAATCCGGTTCGGTTCCGGTTTATCTTAACGTATATGATCTTACCCCAATTAATGGTTATGCTTATTGGTTTGGTCTTGGTGTTTATCATTCTGGTGTTCAAGTTCATGGTGTTGAATATGGATTTGGAGCACATGACCGTGAAACTACTGGAATTTTTGAAGTGGAGCCGGGAAAATGTCCAGGATTTACTTTTAGAAAATCAATTTACATTGGATCAACTGATATGGGACCGAAGGAGGTTAGGGAGTTTATGGAGAAGCTAGCCGAAATGTATCCTGGAAATACCTACCATCTTATACAAAAGAATTGCAACCATTTCTGTAGTGATGTTTGTGTCAGATTAACCGGAAAGTCAATTCCTCGATGGGTTAATAGACTCGCTAGAATTGGTTTTCTATGCAACTGCGTTCTTCCAACCAGCCTAAATGAAACAAAGGTTGGACAAGGTACATTAGACAGGAATCAGGAAggagaaaataagaaaatgagAAGTCAGTCCCGCAGGCACGAGGCTTCTTCCAGTCCTTCATTGTCTGCTAGCCAAAGACATTGCCTTCCTCCATCTTCGTGTGTAATTAATACTTCTTCATCCTCAACCATAGCAGTAAAGTAA 651 0.3902 MLCKLVPLSRKKKSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGVEYGFGAHDRETTGIFEVEPGKCPGFTFRKSIYIGSTDMGPKEVREFMEKLAEMYPGNTYHLIQKNCNHFCSDVCVRLTGKSIPRWVNRLARIGFLCNCVLPTSLNETKVGQGTLDRNQEGENKKMRSQSRRHEASSSPSLSASQRHCLPPSSCVINTSSSSTIAVK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00659 216 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Tsu01g00659 216 MobiDBLite consensus disorder prediction 167 181 - -
Tsu01g00659 216 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Tsu01g00659 216 PANTHER DESUMOYLATING ISOPEPTIDASE 2 214 IPR008580 GO:0008233
Tsu01g00659 216 MobiDBLite consensus disorder prediction 160 197 - -
Tsu01g00659 216 MobiDBLite consensus disorder prediction 182 197 - -
Tsu01g00659 216 Gene3D PPPDE domains 12 169 IPR042266 -
Tsu01g00659 216 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Tsu01g00659 216 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00659 Tsu-Chr1 5818953 5822388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00659 K22763 - gmx:100810627 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00659 01 5818953 5822388 Tsu07g00698 07 5656861 5659374 PCT