Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00644 ATGcaggaagaaaaaaatcaagaagATTCAATTTGTGAATCTGATGAACAAAATGAAGAAACTAAGTCAAAGGGTATTTGGATTTGTAACATTTTTTGTATTCCAATTCATTGGTTCAAAATGCTTTCAAGAGAAATGCATTGGAGTTTTGTTTTTggagttgttgttgtttatggAATAAGTCAAGGTGTTGGTGGAGCTCTTGCTGGTGTTGGAACAAAGTATTATATGAAAGATGTTCAGAAAGTTCAACCTTCTGAAGCACAAGTTTATGCTGGAATCACTTCTATTCCTTGGATTGTTAAGCCTTTATGGGGTCTTCTTACTGATGTTCTTCCTATTTTTGGATACCGTAGAAGAccttatttcatttttgctGGTTTACTAGGAGCAATTGCCATGCTTTTGTTATCTTTCCATGAAAACCTGCATCTTGTGTTAGCGCTTCTAGCATTAACAGCAGGGAGTGCTGGTGTTGCAATAGCCGACGTGACCATTGATGCATGTGTTGCACAGAACAGTATCTCTCATCCTTCCcttgctgctgatatgcaaagTTTATGTGCCTTTAGTTCTTCTGTTGGAGCACTATTAGGATTCTCCGTTAGTGGCATCTTTGTTCACCTTATAGGCCCTATGgGAGTATTTCGTTTGTTGACTATTCCAGCGGGACTTGTAATTTTGGTTGGTTTTATGCTTGACGAGCCTCGTATGGAAAACTTCTCTTACAGACAGGTGAACCAAAAATTTGTGGATGCTGGCAAGGCTATGTGGACTACATTAAAGAGTGAAGATGTATGGAGACCTTGTTTATACATGTATTTATCCCTTGCACTAAGTTTGAATATCCTTGAAGGAATGTTTTACTGGTATACAGACTCAAAGGAGGGGCCATCTTTCTCGCAGGAGAGTGTAGGTTTCATATTTTCAATCAGTTCAGTCGGTTCTCTTCTAGGCGCAATACTATACCAATACGCGCTAAAGGATTACGCGTTCAGAGACTTACTCTTTTGGACTCAATTACTCTATGGTCTATCAGGGATGTTTGATCTGATTTTAGTCTTGAGATTAAACCTCAAATTCGGTATACCAGATTACGTCTTTGTCGTAATCGTCGAAAGCATAGCTCAAATGACAAATAGACTAAAGTGGATGCCAATGCTTGTACTAAGTTCAAAGCTTTGTCCTTCTGGTATTGAAGGAACATTCTTTGCTCTATTAATGTCAATCGATAACGTTGGAGTTCTATCATCTTCATGGGGTGGTGGATTGGTACTTCATGTTCTAAAGATCAcaagaacaaagtttgataaCATTTGGTTAGCGATTTTGATTCGGAACATTTTACGACTCACTCCACTTTGTATGCTGTTTTTGGTGCCTAGAGTTGATCCAAACTCTTTCATTCTTCTTCCAAAAGAAAATGTGGATCCAAAAGTGGATGCTATTGACACTTCAGAAACAAAAGATGTTGAATTGATGTCCCTTGTACACAGTGTTGATGGTAATATATAA 1515 0.3584 MQEEKNQEDSICESDEQNEETKSKGIWICNIFCIPIHWFKMLSREMHWSFVFGVVVVYGISQGVGGALAGVGTKYYMKDVQKVQPSEAQVYAGITSIPWIVKPLWGLLTDVLPIFGYRRRPYFIFAGLLGAIAMLLLSFHENLHLVLALLALTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCAFSSSVGALLGFSVSGIFVHLIGPMGVFRLLTIPAGLVILVGFMLDEPRMENFSYRQVNQKFVDAGKAMWTTLKSEDVWRPCLYMYLSLALSLNILEGMFYWYTDSKEGPSFSQESVGFIFSISSVGSLLGAILYQYALKDYAFRDLLFWTQLLYGLSGMFDLILVLRLNLKFGIPDYVFVVIVESIAQMTNRLKWMPMLVLSSKLCPSGIEGTFFALLMSIDNVGVLSSSWGGGLVLHVLKITRTKFDNIWLAILIRNILRLTPLCMLFLVPRVDPNSFILLPKENVDPKVDAIDTSETKDVELMSLVHSVDGNI 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00644 504 SUPERFAMILY MFS general substrate transporter 51 459 IPR036259 -
Tsu01g00644 504 Pfam BT1 family 62 229 IPR039309 -
Tsu01g00644 504 Pfam BT1 family 272 462 IPR039309 -
Tsu01g00644 504 Gene3D MFS general substrate transporter like domains 44 446 IPR036259 -
Tsu01g00644 504 TIGRFAM fbt: folate/biopterin transporter 45 465 IPR004324 GO:0016021
Tsu01g00644 504 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 17 502 IPR039309 -
Tsu01g00644 504 PANTHER FOLATE-BIOPTERIN TRANSPORTER 2-RELATED 17 502 - -
Tsu01g00644 504 CDD MFS_FBT 73 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00644 Tsu-Chr1 5619031 5622884 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00644 - - ccaj:109816000 829.706