Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00613 atgtTTAACCCAACCACGCGTGTTATCAATGAACCCAGTGCGGTTCTCGATTTAGGTTCACAAATTGGGCGTTTCACAATCGATACGTCGTCGTTTCTCAACTTGAGTTCCGAAGCTTGTTCTCCATCACTTCTCTCCAATTTCATCCACTTCAACAACGTTGCAGCGCGTGCTACACCAAAACGCACCGTTTCGTTGAGTTTAAAGCTTAGTAGTGGCGGTAATGGATTCAAATTCCGGAATTTTGTTCATGATTTTAACAGAGCTATTAGGTTTCATTGTGATAGGATTCCGATTGGGTTTGCTTCGTTAAGATTGAGTGATGGCAACAGTGACGGTAATGATGGTAATGGTAACGGTGAGGGTGTTGGTGGAAATGAGAATGGTACTGTTGTGGAAGATGATGGATTGAAATTGAACGGTTCTGATTGTGTTAAACCTaagaaagttttgattttgatgagtGATACTGGTGGTGGTCATCGAGCTTCTGCTGAAGCTATTAAAGCTGCTTTTTATCAAGAATATGGCGATAATTATCAGGTGTTTATCACTGATTTGTGGTCTGAGCACACGCCTTGGCCGTTCAATCAAATTCCCAAGAGCTATAGTTTTTTGGTGAAACATGGCCCATTATGGAAGATGGCCTACTATGGAACTGCCCCACGTCTAGTTCACCAGTCCAATTTCGCCGCAACTTCAACATTCATAGCTCGTGAAGTTGCTAAAGGGTTAATGAAGTATCAGCCTGATATAATAATCAGTGTGCATCCACTGATGCAACACGTTCCACTTCGCATTTTGAGGTCAAGGGGTCTTTTAGATAAGATTGTTTTTACCACAGTTGTTACAGATATGAGCACGTGCCATCCAACATGgtttcacaagCTTGTTACTAGATGTTATTGTCCAACAACAGATGTTGCAAAAAGGGCAATGAAAGCTGGACTAAAGCAAACCCAAATAAAGATTTATGGCCTACCTGTTAGACCTTCCTTTATTAAGCCTGTTCGGCCGAAGGAGGAACTGAGGAGAGAGTTAGGGATGGATGAGGATCTTCCTGCTGTATTATTGATCGGAGGAGGTGAAGGTATGGGTCCGATAGAGGCTACTGCTCGGGCACTTGGAGATTTATTAAATGATGAGGGGATTCCCACAGGTCAGATCCTTGTGATCTGTGGACGCAATAAGAAGCTTGCTAACAAACTCAGTTCTATCAATTGGAAGATTCCCGTGAAGGTCAAAGGATTTGTTACCAAAATGGAGGAATGCATGGGAGCTTGTGATTGCGTTATTACAAAGGCAGGCCCAGGGACAATTGCTGAGGCCATGATTCGAGGCCTACCTATTATTTTAAACGATTACATTGCCGGGCAGGAAGCTGGCAATGTTCCCTATGTTGTTGAAAACGGATGTGGAAAGTATTCCAAATCTCCTAAGGCAATAGCAAAAATTGTTGCAGACTGGTTTGGTCCCAAAGCCGACGAACTGAAAGCAATGTCACAAAATGCATTAAAGCTAGCAAGACCGGACTCTGTGTTCAAGATCGTCCATGACATGCACGAGTTAGTAAAACAAAGAAGCTTATTAGCAGAGTATTCTTGTACAGCTTAA 1614 0.4195 MFNPTTRVINEPSAVLDLGSQIGRFTIDTSSFLNLSSEACSPSLLSNFIHFNNVAARATPKRTVSLSLKLSSGGNGFKFRNFVHDFNRAIRFHCDRIPIGFASLRLSDGNSDGNDGNGNGEGVGGNENGTVVEDDGLKLNGSDCVKPKKVLILMSDTGGGHRASAEAIKAAFYQEYGDNYQVFITDLWSEHTPWPFNQIPKSYSFLVKHGPLWKMAYYGTAPRLVHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRSRGLLDKIVFTTVVTDMSTCHPTWFHKLVTRCYCPTTDVAKRAMKAGLKQTQIKIYGLPVRPSFIKPVRPKEELRRELGMDEDLPAVLLIGGGEGMGPIEATARALGDLLNDEGIPTGQILVICGRNKKLANKLSSINWKIPVKVKGFVTKMEECMGACDCVITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKYSKSPKAIAKIVADWFGPKADELKAMSQNALKLARPDSVFKIVHDMHELVKQRSLLAEYSCTA 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00613 537 Pfam Glycosyltransferase family 28 C-terminal domain 371 476 IPR007235 GO:0016758
Tsu01g00613 537 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 161 329 IPR009695 GO:0009247|GO:0016758
Tsu01g00613 537 Gene3D Glycogen Phosphorylase B; 338 508 - -
Tsu01g00613 537 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 94 527 - -
Tsu01g00613 537 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 148 524 - -
Tsu01g00613 537 CDD GT28_Beta-DGS-like 150 524 - -
Tsu01g00613 537 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 94 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00613 Tsu-Chr1 5406837 5412866 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00613 1 537 Glycosyltransferase AT4G31780 65.432 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00613 K03715 - gmx:100804814 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00613 01 5406837 5412866 Tsu01g00613 01 5406837 5412866 ECH