Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00596 ATGGCAACCTCTTCCTTCTTAGcctcaaatttcaaattcacactccCTTCGAAGAATCCTAGGTATCTGTCTGTGTTTCATCGATTCAGACACCAACACCCAAATGGTTTTTCTTTCAACAAATGTTCCAAATTTCAATCTATCTCTACTAGGATAGTCTCAGATACTACAAAAACAGCTCCTGATACGTATGTTGGAAGAGACAATAGCAACTTGAACTCTTGTCTTGTGATTCCACCACCTACTTCAACCAAACCTAGAGCTATAATCAAATTCATTGGTGGTGCTTTCATTGGTGCTATTCCTCAACTTACTTATGGCTATCTAATAGAGTTATTGGCAAAGGAAGGTtttgttgttgtggtggtgCCTTATAATGTAACATTTGATCATTCTCTTGCTGCTAAACAAGTATATGAGAAGTTTCATTCTTGTTTGGATACAATCCTTACTTCTGGATTGCCTCAAGCCAATTTGTCACCTGCTCAGCTTGGAGACCTTCCTATTTTCTCTGTTGGCCATAGcaATGGTGCACTTCTTCAAGTACTCATAGGAAGCTTATTTTCTGAGAAATTACCCAAGGCTAATGCCGTAATCGCTTACAACAACAGACCAGCGACAGAGGCGGTCCCTTACTTCGAGCAGTTGGGCCCTGCAGTCAGCCAGATGATGCCGGTTGTGGAAGCAAATCCTCTTTACTCAATAGCTAGAAATGCACAAGGAGATGCATGGAAGGTGGCGCTGGATACTTTTGGATCATTTCTGCAGGAAAGTGAGAAGGAAGTTCTGAACTCTTTAACTAAATTTGTTGATCAGCTGCCTTTAGTAATGAGTGAGGTTACGCAGGGAGTCTCAGAGTTCAAGCCAACACCATCTGAAAATCGCGATTGCTTTAAAACTTCATACAATGTGAAACACACACTATTGGTGAAATTCAATTCCGACGCAATTGACGAAACAAATATTGTTGAAGAAACACTCAAGCCTCGTGCGGAGTCCTTTGGTGGGACAGTAGAAAAAGTAGAATTGAGCGGTAACCACATCACACCATGCATCCAGGAACCTAGATGGCAAGTGGGGAAGATGTATACTCCAGCAGATGCCGTTGCTCAAAGGCTCAAGTCACTTTCTTTGAGTGATATTAGAATCCTTTCCACAACCATTAGTGATTGGTTCAAACGTTTTGAGGAATGA 1194 0.4003 MATSSFLASNFKFTLPSKNPRYLSVFHRFRHQHPNGFSFNKCSKFQSISTRIVSDTTKTAPDTYVGRDNSNLNSCLVIPPPTSTKPRAIIKFIGGAFIGAIPQLTYGYLIELLAKEGFVVVVVPYNVTFDHSLAAKQVYEKFHSCLDTILTSGLPQANLSPAQLGDLPIFSVGHSNGALLQVLIGSLFSEKLPKANAVIAYNNRPATEAVPYFEQLGPAVSQMMPVVEANPLYSIARNAQGDAWKVALDTFGSFLQESEKEVLNSLTKFVDQLPLVMSEVTQGVSEFKPTPSENRDCFKTSYNVKHTLLVKFNSDAIDETNIVEETLKPRAESFGGTVEKVELSGNHITPCIQEPRWQVGKMYTPADAVAQRLKSLSLSDIRILSTTISDWFKRFEE 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00596 397 Gene3D alpha/beta hydrolase 61 275 IPR029058 -
Tsu01g00596 397 Pfam Protein of unknown function (DUF1350) 84 392 IPR010765 -
Tsu01g00596 397 PANTHER OS04G0405600 PROTEIN 44 395 IPR010765 -
Tsu01g00596 397 PANTHER INITIATION FACTOR 4F SUBUNIT (DUF1350) 44 395 - -
Tsu01g00596 397 SUPERFAMILY alpha/beta-Hydrolases 41 200 IPR029058 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00596 - - gmx:100799131 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00596 01 5249297 5253751 Tsu01g00596 01 5249297 5253751 ECH