Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00582 ATGATGATGAAACCAAAGTTTGATTCTGAAAATAAAGATAATGGTAAAGTTGTTGGTGAAATTGAAACTGATTGGAAAAATGGTCAACAAGAATTACTTTTTGATATTCAAGAATTAAGCAATGCTCTTTACTTGCAAAATACCCCTTTTAAGCCTTCAACACTTTCCTCAGTCAATAATAGATCTAAGTCTGCTGAAGAAACCCGTTTGTCGAAATCTGAACTTAACTCAAAGCCGAGATTTGTAAGTGAGGATCTGTTGATAAGGGATAAGAAGTTGTTATCTTTAGGATGGAATTGGAAGAAGCCGTTGAAAGCTTTGACTCATATCGGTTCTCGAAAGTTTGTTTGTTGCTTTAAACTTCATGTCCATTCAATCCAGGGGCTTCCCTTGAGTTTTAACGGCGTTAGATTATCTGTGCattggaaaaggaaaaacagCATTTTGCAGACGTGCCCGTCAAGGGTATTGCAGGGTTCTGCGGAGTTTGATGAAACTTTGATACATAGATGTACTGTTTATGGTAGCCGCACGGCGTCTGGTCATGCTGTTAAGTATGATTCCAAACGTTTCTTGATTTATGCTTCTATTGTAGGGGAACCTGAATATGACATTGGGAAATATCAAGTTGATCTTACAAGGCTTTTacctctgagtttagatgagtTATGGGGTGATAAAAGTTCGGGGAAATGGAGTACGAGTTTTAGCTTGGTTGGGAAAGCTTTAGGAGCTAGAATAAATGTTAGTTTCAGTTATCAAGTTATGAACGATGAATTAATGAGATTTGGTGGTAGTAATGGGAATGTAGTTAAACTTATTAACTTGAAGACGGATCTAAGCAGCCTCGACAATGTTGGTGGTTTCAGTCCCAAGAATAGGGACATAAAGGTTTGGCAGACTCCGAATGATGCAGTGTTATCGAATGAAGCAGTGACGAATTCTGGCTCAGGCTTTTCTAAATCAATCACTTTCCTGTATCAAAAGCTTGATGAGGGGGACTTTGATAATTCAGCATGGGCAGACTCAGAGTCATCTCAAGGATCAAATCTATACGTGTCTGATGACACTGAATTTTCCATCAGTGAACAAGGAGTAGAAACATCAGAAGAGGATTCGTTCGAATTTGATCAAACAGGAATTCAAATAGTTGATATGTCTACAGTTGAAATCATTAATGTGGATGAGATTCTTAACGATGCTGACACGTTTGTTGACAAGAATGCAAGATGTGATTCACTGGATACCGTATATTCTAGCAATGTAAATGTTGATATGGAAGATAACAGCAAGCAAAGATTCAGTTTTTCATCCGTCGATCTATCATGCATGAAGGTTGAGGATTCAGTTCCTGAGACATCAGAGCTTCTTGAACAAGAAGAACACTACTTGAGTgttaaatcaaattataaagCACATAAAAAGTCACATAGCTTGGATGACATCATTGACTCTGTCGCGAGTGATTTCTTAAAGACGCTGGCATTGGAGAGCGATTCATTTCGCTCAAGCTCTGATGGTGATCCCTTGTCTCCTAGAGAGCATCTTTTAAGACAGTTTGAAAATGAGGCTCTAGCTTCAGATAACTTCGCTTTTGATTTTGATGCAATCGAGGAGGAATTGGGGGAAGATACTCTTGAACACAACTGTGGGAATTATGCTGTGGATTCTGATTTATCTTTACTTATTGGTGCCGCCGAAGAGGAGTATGAAATGGAAAATCAATCATTAATTCAAAGAAGGAAGGCCAAGATTATTGAAGATTTGGAAACTGATACATTAATGCAACAATGGGGTTTAGATGAGAGGGACTTTGAAAATTCTCCAAGAACATGGGCTGGTGGATTTGGAAGTCCAATTGAACTATCCGACGAAGAACCAACCATATTACCATCAATTGGTGAAGGGCTTGGTTCGTTTGTTCAAACAACAAATGGCGGCTTTTTGAGGTCCATGTGTCCTTCACTCTTCAAAAATGCTAAGAATTGTGGGAACCTCATCATTCAAGCATCTAATCCAGTCGTTCTACCAGCGAAAATGGGTAACGATATATTGGATATACTTCTGCACATGGCATCTGCTAGAGTTCAAGAGCTGCATGATAACATCTCTAAATTAATGCCTTTGCAAGATATCACTGGAAAATCCATTAAGCATATTGTGTCGGATGCCGACAGGATGGGATCATGGCAGCATGATTTCTTTGAAGAATTTCCAAGTAGTTATTTAACAGATAAAGACAAATGCTTGGACTCCGTGTCTCTAGAAGCTATAGCTCCTATGAGTATTAATGAGATTGAAACTCTTTTAATAGAAGGGTTGAGAATTCAATCTGGCATGTCAAATGAGGAGGCACCATCAAACATTCATGGAGAGATCGACAATGATCTTGATGGTTTGATGGGTCTGTCTGTAACATTGGATCAATGGTCGAGACTTGATTCTGGCATCATTCAAGGAAAACATAATTTGGGACAAATTTTGAAGACCCTTGAAGCACACAATTATAAAATCACTGAATTAGATAATGAAGGGTTGAAAAGTGCCGCAGATAATGCGGAAATAGATGACGACAAGCGCAGATATTTGGGAAATCACGTAACAGTTGCTTTTATGATCCAGCATAGAGATCCTCTAAGAAATTATGAAGCAGTTGGAGTTCCAATGCTGGTTTTGACTCGGGTAGAAAGAGTTGACAGCAATTTTGTTGAGGATGCAGATATAGACACAAAAACCCTTCAATCTAGATTCAAAATCAAGGAGATTCATCTTGCAGGTGTCCTTAACAAAGCTGGAAACCGGCAAGTTTGGGGCACTGCATCTCAGCAACAATCCGGGTTGCGTTGGTTGCTTGCGAGTGGCATGTGTAGTAGTACTGTCAAACACTCTTCTTCAAAATCAAAGTCGATTATTGTTAGACCATCTTCTCTGTTTACTAACAAGTCGATGAATCAGGATATCTTGTGGAGCATTTCTTGTGTTAAAGATAACATGGATACTAATGCACACATTAGGAATGTTGATATCATCTTCCCAAAGTGA 3042 0.3823 MMMKPKFDSENKDNGKVVGEIETDWKNGQQELLFDIQELSNALYLQNTPFKPSTLSSVNNRSKSAEETRLSKSELNSKPRFVSEDLLIRDKKLLSLGWNWKKPLKALTHIGSRKFVCCFKLHVHSIQGLPLSFNGVRLSVHWKRKNSILQTCPSRVLQGSAEFDETLIHRCTVYGSRTASGHAVKYDSKRFLIYASIVGEPEYDIGKYQVDLTRLLPLSLDELWGDKSSGKWSTSFSLVGKALGARINVSFSYQVMNDELMRFGGSNGNVVKLINLKTDLSSLDNVGGFSPKNRDIKVWQTPNDAVLSNEAVTNSGSGFSKSITFLYQKLDEGDFDNSAWADSESSQGSNLYVSDDTEFSISEQGVETSEEDSFEFDQTGIQIVDMSTVEIINVDEILNDADTFVDKNARCDSLDTVYSSNVNVDMEDNSKQRFSFSSVDLSCMKVEDSVPETSELLEQEEHYLSVKSNYKAHKKSHSLDDIIDSVASDFLKTLALESDSFRSSSDGDPLSPREHLLRQFENEALASDNFAFDFDAIEEELGEDTLEHNCGNYAVDSDLSLLIGAAEEEYEMENQSLIQRRKAKIIEDLETDTLMQQWGLDERDFENSPRTWAGGFGSPIELSDEEPTILPSIGEGLGSFVQTTNGGFLRSMCPSLFKNAKNCGNLIIQASNPVVLPAKMGNDILDILLHMASARVQELHDNISKLMPLQDITGKSIKHIVSDADRMGSWQHDFFEEFPSSYLTDKDKCLDSVSLEAIAPMSINEIETLLIEGLRIQSGMSNEEAPSNIHGEIDNDLDGLMGLSVTLDQWSRLDSGIIQGKHNLGQILKTLEAHNYKITELDNEGLKSAADNAEIDDDKRRYLGNHVTVAFMIQHRDPLRNYEAVGVPMLVLTRVERVDSNFVEDADIDTKTLQSRFKIKEIHLAGVLNKAGNRQVWGTASQQQSGLRWLLASGMCSSTVKHSSSKSKSIIVRPSSLFTNKSMNQDILWSISCVKDNMDTNAHIRNVDIIFPK 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00582 1013 ProSiteProfiles C2 NT-type domain profile. 107 255 IPR019448 -
Tsu01g00582 1013 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 3 1013 IPR039614 -
Tsu01g00582 1013 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 112 257 IPR019448 -
Tsu01g00582 1013 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 2 3 1013 IPR039823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00582 Tsu-Chr1 5124886 5128620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00582 - - mtr:MTR_1g015120 1456.43