Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00572 ATGGGAGAGGCTCCAGCTCCAGAAGTGTTGTATGTTAATGGTTCCTCAAAAGTTGTTCCTGAAACTCAACAAAATCATGTCAACAACGTTAATGTTTCTGATACATGGTATGAGGAAGTCATCGATGATGATCTCAAATGGTCATTTAAACTGAATAGTGTGCTCTATAAAGCCATTAGTGAATACCAAGACATTGCTCTCTTAGATACAAAGCGTTTTGGAAAGGCCTTGGTGCTTGATGGGAAGATGCAGAGTGCTGAAGCAGATGAATTCATTTATCATGAATGCTTGATTCATCCTCCTCTTTTATCCCACCCCAACCCAAAGACAGTGTTTATAATGGGAGGTGGTGAAGGTTCTGCTGCTAGGGAAGCTCTCAAACACAAGTCAATGGACAAAGTTGTTATGTGTGATATTGACAAGGAGGTGGTAGATTTCTGCCGAAAATACCTGATTGCAAATAAGGAGGCATTTGCTAATAAGAAGCTTGACCTTGTCATCAATTGTGCTAAGGCTGAATTAGAGAAGAGAAATGAGAAGTATGATGTGATTGTTGGAGATTTGGCTGACCCACTTGAAGATGGGCCTTGCTATCAACTCTACACTAAGGACTTCTATGAGAAAGTTGTTAAGCCCAAACTCACTAAGAATGGCATTTTTGTCACCCAGGCTGGACCAGCAGGTATCTTCTCACACAAAGAGGTCTTCACCTCTATACACAACACTGTAAAACAGGTCTTCAAATACGTGGTGGCATACTCTACTCATGTACCATCATTTGCTGATTCATGGGGATGGGTTATGGCTTCAGATCAACCAATATTGATTGATGCTGTTGAAATGAACAAAAGAATTGAAACAAGAATAGATGGGAAGTTGCTCTATCTAGATGGTGTTTGGTTCCACTCAGCTACCATCATGAACAAGACTGTGTCCAAATCgcTGCAGAATGAAACTCATGTGTACACTAAAGATAATGCTAGATTTATTCCTGGACATGGCATACTCTAA 1011 0.4026 MGEAPAPEVLYVNGSSKVVPETQQNHVNNVNVSDTWYEEVIDDDLKWSFKLNSVLYKAISEYQDIALLDTKRFGKALVLDGKMQSAEADEFIYHECLIHPPLLSHPNPKTVFIMGGGEGSAAREALKHKSMDKVVMCDIDKEVVDFCRKYLIANKEAFANKKLDLVINCAKAELEKRNEKYDVIVGDLADPLEDGPCYQLYTKDFYEKVVKPKLTKNGIFVTQAGPAGIFSHKEVFTSIHNTVKQVFKYVVAYSTHVPSFADSWGWVMASDQPILIDAVEMNKRIETRIDGKLLYLDGVWFHSATIMNKTVSKSLQNETHVYTKDNARFIPGHGIL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00572 336 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 35 315 IPR029063 -
Tsu01g00572 336 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 34 271 IPR030374 -
Tsu01g00572 336 PANTHER BNAA02G04280D PROTEIN 6 335 - -
Tsu01g00572 336 Gene3D Spermidine synthase, tetramerisation domain 34 86 IPR037163 -
Tsu01g00572 336 Gene3D Vaccinia Virus protein VP39 87 334 IPR029063 -
Tsu01g00572 336 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 6 335 - -
Tsu01g00572 336 Pfam Spermine/spermidine synthase domain 90 266 - -
Tsu01g00572 336 Hamap Polyamine aminopropyltransferase [speE]. 35 316 IPR001045 GO:0003824
Tsu01g00572 336 Pfam Spermidine synthase tetramerisation domain 36 87 IPR035246 -
Tsu01g00572 336 CDD AdoMet_MTases 115 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00572 Tsu-Chr1 5080256 5084412 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00572 K18787 - gmx:100784972 575.089