Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00563 ATGAAGAACGATTGGTTATCATGGATGGATTCAGATCCAAACATGTATCCATTACAACCATTTGTATTCAACAATTTCTTACGTTCTCAATTTCTACAATCATTTCTAGAAAATTCCAGAAACTTCTACGAAACTTCGGCGATAGATGAAGCATTCGGCCACCTGTCGAAATTCGCCGGCGCGTTCTTGTTTTGGTTTAACGGTAGTGGATCGAATGTTTGCGGTGGTGATTATCTTCAATTTGGCGGTGGTTCTGGTAATGCGCATATGAATATTAAGGTTAAGCCTGTGATTACGAATAATGTGGCTGGGTTTGGGTTTCCGTTTGGTTTTAAGTCGAAGAGGAAAGGTTTGGAACGTGTGAGTTTGGGGAAGATTTCgaattttgttgttaatttttttcgGAGAGAAGCTAAAAGGATTCAATCGTATCCTATTATTTGGCTTACTACTGCATTGGTGTCTCAAAACTGGTCATCAAATCTACTGTCTGGGCCAATGCAGGATCCTGATGTGCAAATGCATGAGAGCATAGACCGAATGCCAAAGGATTTTGAACGTCCAGGATGTCCTCGCCTATCCGTTTCCAAGTTGAACCTAGCAAAATCTGCTGTGGAGCCTAAAACTGGCATTGAATTTCCTGTGGTTCTGGATAATTTATCAGATGGAGAGCAGAATTCTAGCTTTAACTCAGAGGTCCTGGTTGGAACTGGATACAAAAACATGACAATTGTTAAAATCAAGACGCTGAAAGTCTATGCTTTTGGGTTTTATGTTCACCCGTACTCCCTCTGTGAGAAGTTGGGCCCAAAATATGCATCAATTTCTGCAGATGAACTGGATAACCGTAATGATTTCTACCAGGATCTTCTCAGGGAAGATATCAATATGACTGTTAGGCTTGTCGTAAATTGGAAAGGATTGAAAATTAACTCTGTGAAAGATgcttttgaaaaatctcttaGAGCACGATTAGTTAAGACAAATCCATCCACAGACTTTGATTGCCTTTGGACATTTGGTTCATACTTTACGGAGAATATCTCAATACCTTTGGGAACAGTTATTGAGTTTAAGCGAACAGTTGATGGACGTCTGATTACTGAAATTGGTGGCAATCACATTGGAAGTGTTCACAGCAAAGATTTGTGTCgGGCTTTCTTTGGCATGTACATTGGAGATGTCCCTGTTTGCGAACAAACTAAGAAAGAGATTGGCACAAACATCGCAAATATTATTAGGAGTTGTTGA 1251 0.3893 MKNDWLSWMDSDPNMYPLQPFVFNNFLRSQFLQSFLENSRNFYETSAIDEAFGHLSKFAGAFLFWFNGSGSNVCGGDYLQFGGGSGNAHMNIKVKPVITNNVAGFGFPFGFKSKRKGLERVSLGKISNFVVNFFRREAKRIQSYPIIWLTTALVSQNWSSNLLSGPMQDPDVQMHESIDRMPKDFERPGCPRLSVSKLNLAKSAVEPKTGIEFPVVLDNLSDGEQNSSFNSEVLVGTGYKNMTIVKIKTLKVYAFGFYVHPYSLCEKLGPKYASISADELDNRNDFYQDLLREDINMTVRLVVNWKGLKINSVKDAFEKSLRARLVKTNPSTDFDCLWTFGSYFTENISIPLGTVIEFKRTVDGRLITEIGGNHIGSVHSKDLCRAFFGMYIGDVPVCEQTKKEIGTNIANIIRSC 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00563 416 PANTHER FATTY-ACID-BINDING PROTEIN 2 12 416 - -
Tsu01g00563 416 SUPERFAMILY Chalcone isomerase 205 413 IPR036298 GO:0016872
Tsu01g00563 416 PANTHER FATTY-ACID-BINDING PROTEIN 2 12 416 - -
Tsu01g00563 416 Gene3D - 205 391 IPR016088 -
Tsu01g00563 416 Gene3D - 263 406 IPR016089 -
Tsu01g00563 416 Pfam Chalcone isomerase like 233 405 IPR016087 GO:0016872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00563 Tsu-Chr1 4944162 4949285 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00563 - - gmx:100803025 516.924