Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00554 ATGGAGGATTACAACAAACCAAGTTCTTATGGAAATGATCAAATGATGCAGATGGAGAGCTACTATGAAAAATCTATGCCTAATAATTATGATATAAGGTCCTATAGTGTTTCACATGCACAAAATCAAATTGGTCATAACAATAAAGACTTGAAGTTTAAGAAAGGGAAAAGTATTTCATCAAGGTCTTCAATTTCTAAGTCATGGAGCATTGGTGATGATCCTGAATTTCAAAGGAAGAAAAGGGTTGCTAGCTATAAAATGTATTCTGTTGAAGGGAAAGTGAAAGGTTCTTTTAGGAAGAGCTTCAAGTGGCTAAAGAATAGGTATTGGCATGTTGTTTATAGCTTGTGGTGA 357 0.3417 MEDYNKPSSYGNDQMMQMESYYEKSMPNNYDIRSYSVSHAQNQIGHNNKDLKFKKGKSISSRSSISKSWSIGDDPEFQRKKRVASYKMYSVEGKVKGSFRKSFKWLKNRYWHVVYSLW 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00554 118 Pfam Domain of unknown function (DUF3511) 73 115 IPR021899 -
Tsu01g00554 118 PANTHER DUF3511 DOMAIN PROTEIN 1 116 - -
Tsu01g00554 118 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00554 Tsu-Chr1 4855483 4855839 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00554 - - gmx:100780149 144.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00554 01 4855483 4855839 Tsu07g00800 07 6566365 6571709 PCT