Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00545 ATGCAAGACCTACGCCGTTACTCAAACGACATAATCCAACTCGACCTAGCCACCACCACAACCGCAACaaccaccacaacaacaacCATGTCTATGAATTCAAACTCCTCTTCTTCCTTATCCATCGACATAGACGAATCAGCCGAAACTAAAATCCACCGTCTCATAACAGAACATCCAGTCATCATCTTCACACGATCTTCTTGTTGCATGTGCCACGTCATGAAGAAGCTTCTCTCAACTATCGGTGTTAATCCAACCGTCATAGAATTAGATGATAACGAGATCGCTTCTCTTCCTcatgatgacgatgatgatcTTGCTTCTGTTCTTCGTAACCGTTCTCCTGCCGTCTTCATCGGTGGTGCTTGCGTCGGAGGTCTAGAGTCTCTTGTTGCTCTCCACGTCAGCGGTCATCTTGTTCCTAAACTCGTTCAAGTCGGTGCTCTTTATGTATGA 459 0.4227 MQDLRRYSNDIIQLDLATTTTATTTTTTTMSMNSNSSSSLSIDIDESAETKIHRLITEHPVIIFTRSSCCMCHVMKKLLSTIGVNPTVIELDDNEIASLPHDDDDDLASVLRNRSPAVFIGGACVGGLESLVALHVSGHLVPKLVQVGALYV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00545 152 CDD GRX_GRXh_1_2_like 60 143 - -
Tsu01g00545 152 PANTHER GLUTAREDOXIN-C6 21 151 - -
Tsu01g00545 152 SUPERFAMILY Thioredoxin-like 48 150 IPR036249 -
Tsu01g00545 152 Pfam Glutaredoxin 61 125 IPR002109 -
Tsu01g00545 152 PRINTS Glutaredoxin signature 61 79 IPR014025 -
Tsu01g00545 152 PRINTS Glutaredoxin signature 108 121 IPR014025 -
Tsu01g00545 152 PRINTS Glutaredoxin signature 122 135 IPR014025 -
Tsu01g00545 152 Gene3D Glutaredoxin 42 151 - -
Tsu01g00545 152 TIGRFAM GlrX-like_plant: glutaredoxin-like family 52 151 IPR011905 -
Tsu01g00545 152 ProSiteProfiles Glutaredoxin domain profile. 49 151 - -
Tsu01g00545 152 PANTHER GLUTAREDOXIN 21 151 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00545 Tsu-Chr1 4768748 4769353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00545 52 152 Miscellaneous Gene Families AT4G15690 40.196 2.25e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00545 - - lja:Lj5g3v0407150.1 207.608