Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00530 ATGGAACGTGCAAGAAGACTCGCTAATCGTGCAACTCTGAAACGTCTTCTTTCAGAGGCAAAACAAAATCGTAACAATgaatcatcaacaacaataacaacaccTCTTCCATTTTCACTCTctggttcatcttcttcaagaTACGTTTCCTCTGTTTCTAACTCTGTTTTCAGAAACAGAGGATCCACAAAACCAGACAACAACATTCTTGGAAGAAACAACAATGTTTCACGAGGTATTGGTGGATTTAACGGTGTTGGGTCTTCAACACAATCTCGATCCATCACTGTTGAAGCTCTTAAACCAAGTGATACATTTCCAAGACGCCATAACTCAGCAACACCAgaagaacaaacaaaaatggCTGAATCAGTTGGTTTTGATAACCTTGATTCACTTGTTGATGCAACAGTTCCAAAATCGATTCGTTTGAAGGAAATGAAGTTCAATAATTTTGATGGAGGGTTAACAGAAGGTCAAATGATTGAACACATGAAAGATTTAGCTTCAAAAAACAAAGTTTTCAAATCTTTCATTGGTATGGGATATTATAACACACATGTTCCACCAGTGATTTTGAGGAACATCATGGAAAATCCTGCTTGGTATACACAGTATACACCTTATCAAGCCGAGATATCGCAAGGTCGTCTTGAATCGTTGTTGAATTTTCAAACAATGATTACTGATCTTACTGGTTTGCCTATGTCAAATGCTTCATTGCTTGATGAAGGTACTGCTGCAGCTGAAGCAATGTCTATGTGTAATAATATTCAAAAGGGTaagaaaaaaactttcattATTGCTAGTAACTGTCATCCACAAACAATTGATATATGTCAGACAAGAGCTGATGGATTTGAGCTTAAGGTTGTGGTGAAAGATCTTAAGGATATTGATTACAAATCTGGTGATGTTTGTGGTGTTCTTGTTCAATATCCTGGTACTGAAGGTGAGGTTTTGGATTATGGTGAGTTTATTAAGAAGGCTCATGCTAATGAGGTTAAGGTTGTTATGGCAAGTGATTTATTGGCATTGACTGTGTTGAAACCTCCTGGTGAATTTGGAGCTGATATTGTTGTCGGTTCAGCTCAAAGATTCGGTGTTCCAATGGGTTATGGTGGTCCTCATGCTGCTTTCTTGGCTACTTCACAAGAGTACAAGAGGATGATGCCTGGAAGAATCATTGGTGTTAGTGTTGATTCTTCTGGTAAGTCAGCTTTGAGGATGGCTATGCAAACCAGGGAGCAGCATATTCGTAGGGACAAGGCTACCAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAACATGGCTGCTATGTATGCTGTATACCATGGACCTGAAGGCCTTAAAGCCATTGCACAAAGGGTTCATGGCCTTGCTGGGGTATTTGCTCTTGGATTAAAGAAACTTGGTGTAGAAGTTCAGGATCATGCCTTCTTTGACACTGTCAAGATTAAGACTTCAAATGCCAAAGCAATTGCAGATGCTGCTGTCAAAAGTGAAATCAATTTGCGAGTTGTAGATGGAAACACCATCACTGCTGCTTTTGATGAAACAACCACGTTAGAGGATGTTGATAAGCTTTTCAAAGTTTTTGCTGGTGGCAAGCCTGTGTCATTCACAGCTGCATCTCTTGCACCAGAGTTTCAGAATGCAATTCCTGCCGGATTAGTTAGGGAGAGTTCTTATCTGACACACCCCATCTTTAACACGTACCAAACTGAGCATGAGTTGCTCAGATACATTCATAAGCTACAATCAAAAGATCTCTCACTTGTCCACAGTATGATCCCACTTGGATCTTGTACAATGAAGCTGAATGCAACAACCGAAATGATGCCTGTGACATGGCCTAGCTTTGCTGATCTTCACCCTTTTGCACCAACTGAACAGGCTCAAGGTTATCAGGAAATGTTCAACAATTTGGGTGACCTGTTGTGTACCATCACTGGATTTGACTCTTTCTCTTTGCAACCAAATGCTGGTGCTGCTGGAGAATATGCTGGACTCATGGTTATTCGTGCATATCATTATTCAAGAGGTGACCACCACCGCAATGTTTGCATTATCCCAGTATCAGCACATGGTACAAATCCTGCTAGTGCTGCTATGTGTGGAATGAAAATTGTCACCATAGGAACTGATGCCAAGGGTAACATTAACATTGAAGAGTTAAAGAAGGCTGCTGAAAAACATAAGGACAACTTATCTGCATTTATGGTTACATATCCTTCAACTCATGGTGTCTATGAAGAAGGTATTGATGATATTTGCAAGATCATCCATGATAATGGAGGTCAAGTATATATGGATGGTGCCAACATGAACGCGCAGGTTGGACTTACAAGCCCAGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTTCACAAGACATTTTGCATCCCTCATGGAGGAGGTGGCCCTGGAATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCCTCACATCCTGTGATACCAACTGGTGGAATTCCTGCCCCTGAAAATGCTCAACCACTTGGTAGCATCTCAGCTGCACCTTGGGGATCAGCACTCATATTGCCAATCTCATACACATACATAGCCATGATGGGTTCTAAAGGGCTCACTGATGCGTCAAAGATAGCCATTTTGAATGCTAACTACATGGCGAAAAGATTGGAGAGTTATTACCCAGTTCTTTTCCGTGGAGTCAATGGAACAGTTGCTCATGAATTCATTATTGACTTAAGAGGCTTTAAGAATACTGCTGGCATAGAGCCTGAAGATGTTGCAAAACGTCTCATGGACTATGGATTTCATGGACCAACAATGTCATGGCCTGTTCCTGGTACACTCATGATTGAGCCTACTGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTTTTGTGATGCTCTTATTGCCATTAGAAAAGAAATTGCTGAGATTGAGAAAGGAAATGCCGATGTTCACAACAATGTACTTAAgGGAGCCCCTCATCCACCATCACTTCTCATGGCTGATGCATGGACAAAACCATACTCCAGGGAGTATGCAGCCTTCCCTGCTCCATGGCTCCGTGGTGCCAAGTTTTGGCCTACCACAGGACGTGTTGATAATGTGTATGGCGACCGCAACCTGATTTGCACCCTTCAGCCAGCATCACAGGCTGTTGAAGAACCAGCTGCTGCCACAGCATAG 3198 0.4106 MERARRLANRATLKRLLSEAKQNRNNESSTTITTPLPFSLSGSSSSRYVSSVSNSVFRNRGSTKPDNNILGRNNNVSRGIGGFNGVGSSTQSRSITVEALKPSDTFPRRHNSATPEEQTKMAESVGFDNLDSLVDATVPKSIRLKEMKFNNFDGGLTEGQMIEHMKDLASKNKVFKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICQTRADGFELKVVVKDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFIKKAHANEVKVVMASDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKSALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKAIAQRVHGLAGVFALGLKKLGVEVQDHAFFDTVKIKTSNAKAIADAAVKSEINLRVVDGNTITAAFDETTTLEDVDKLFKVFAGGKPVSFTAASLAPEFQNAIPAGLVRESSYLTHPIFNTYQTEHELLRYIHKLQSKDLSLVHSMIPLGSCTMKLNATTEMMPVTWPSFADLHPFAPTEQAQGYQEMFNNLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHYSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVTIGTDAKGNINIEELKKAAEKHKDNLSAFMVTYPSTHGVYEEGIDDICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVIPTGGIPAPENAQPLGSISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALIAIRKEIAEIEKGNADVHNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAPWLRGAKFWPTTGRVDNVYGDRNLICTLQPASQAVEEPAAATA 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00530 1065 SUPERFAMILY PLP-dependent transferases 109 534 IPR015424 -
Tsu01g00530 1065 CDD GDC-P 158 534 IPR020581 GO:0004375|GO:0006546
Tsu01g00530 1065 TIGRFAM gcvP: glycine dehydrogenase 109 1049 IPR003437 GO:0004375|GO:0006544
Tsu01g00530 1065 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 100 1056 IPR003437 GO:0004375|GO:0006544
Tsu01g00530 1065 Coils Coil 724 744 - -
Tsu01g00530 1065 Gene3D Aspartate Aminotransferase, domain 1 178 530 IPR015422 GO:0003824
Tsu01g00530 1065 MobiDBLite consensus disorder prediction 18 75 - -
Tsu01g00530 1065 Pfam Glycine cleavage system P-protein 551 827 IPR020581 GO:0004375|GO:0006546
Tsu01g00530 1065 Pfam Glycine cleavage system P-protein 109 534 IPR020581 GO:0004375|GO:0006546
Tsu01g00530 1065 CDD GDC-P 577 972 IPR020581 GO:0004375|GO:0006546
Tsu01g00530 1065 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1065 IPR020581 GO:0004375|GO:0006546
Tsu01g00530 1065 SUPERFAMILY PLP-dependent transferases 550 1051 IPR015424 -
Tsu01g00530 1065 Gene3D - 189 449 IPR015421 GO:0003824
Tsu01g00530 1065 Gene3D - 616 846 IPR015421 GO:0003824
Tsu01g00530 1065 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1065 - -
Tsu01g00530 1065 Gene3D Aspartate Aminotransferase, domain 1 864 1003 IPR015422 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00530 K00281 - gmx:100819714 1880.92