LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu01g00529	ATGAGGGAAGAAAATAGTATCAACAACCCATCAGAAAACAAGTCCAAAGTTTCAAAATTTTCCGATCAAAATCAACCACCAAAgcttcaaacaacaaaaggaacAAACCCCAACAACAATCATTCAAAACCAAGGTTATGGGGTGCTCACATTGTAAAAGGGTTTTCAGCtgacaaaaaaaccaaacaacaaTCAACTGTTCTCACAAAAAAACAACATCAGACAACAACCTCGGATGTTGCTAACCAGAAAAACCCTTTTGTTCCAGCTCAATCAAGAGTGAAAAGATCTCTAATGGGTGATTTGTCATGTTCTCAAGTTCATCCACATGCTTTTCCAACACATAGGAGACAATCTTCAACTGATTTGTTCACTGAGTTGGATCATATGAGAAGCTTATTGCAAGAGTCTAAGGAGAGAGAGTCTAAGCTGAATGCTGAGTTGGCTGAGTGTAGAAAGAATCAGAATGAGGCTGATGAGCTTGTGAAGAAAGTTGCTTtgttagaagaagagaaaacTAGTCTCTCTGAACAATTGGCTGTGTTGAGTAGGAGTGGTGGATTGGAGAGACAAGAGGAAGTTGTGAAAGGGGAAAGTAAGGATAGTTCTATGCAGAATCTTGAACTTGAAGTTGTTGAGTTGAGAAGGTTGAATAAAGAGTTGCATATGCAGAAGAGGAACCTCACTTGCAGGCTCTCTTCTATGGAGTCTCAATTATCTTGTTCTCCCAACTCTTCAGAGAGTGACATTGTTGCGAAATTTAAAGCTGAGGCGTCATTGCTCCGGCTGACGAACGAAGACCTGAGCAAACAAGTAGAAGGGTTACAAACAAGCAGATTAAATGAAGTGGAGGAACTAGCCTACTTGAGGTGGGTGAATTCATGTTTACGAACCGAGTTGAAGAATACATGCTCAACTTTGGATTCTGATAAGCCGTCTAGCCCTCAATCTGTTGTGAGTAGTAGCGGAGATTCTATTAGTTCTTTCTCTGACCAAAGCGGTAGCGCAAATAGCTTCAATTTAGTTAAGAAGCCAAAAAAGTGGTCAATAACTAGTGAGTCACAAGTAGAGTGCACAAATAGTAGTCTCATTGAGAAAAATTGGATTGAATCAATTTCTGAGGGAAACAACAGAAGAAGACATTCAATTAGTGGTTCCAATAGCTCAGAGGAAGAGGTTATTGTATTGAATAAAAGACGACAATCTAATTGTTTTGATGCTTTTGATTGtttaaaagaaatggaaaaggAATCAATGCCAATGCCATTGTCTATTCAACAATCTGTTTTGGAAAAGAGGGCATTAAGGATTCCTAATCCTCCTCCAAGACCTTCTTCATGTTCTATTACTagcaaaacaaaacaagaaagCTCGGTTCAAGTTCAAGTTCAACCTCCTCCACCTCCGcctccaccaccacctcctATGAGTTTTGCATCGAAAAGTAATACAGCAATGGTAAAACGAGCGCCACAAGTGGTGGAATTGTACCACTCACTCATGAAGAGAGATTGTAGAAGGGATTCTTCAAATGGTGGACTCTCTGATGCTCCTGATGTTGCAGATGTTCGTAGTAGCATGATTGGAGAAATTGAGAACCGTTCGTCTCATTTACTTGCTATAAAGGCAGATATTGAAACACAAGGAGAGTTTGTAAATTCATTGATTAGAGAGGTGAACAACGCAGTTTATGAGAACATAGATGATGTAGTTGCATTTGTGAAGTGGCTTGATGATGAACTTGGCTTCCTTGTGGATGAAAGAGCTGTTCTTAAACATTTTGATTGGCCAGAGAAAAAAGCCGACACATTAAGAGAAGCATCATTTGGATATCAAGACTTGAAAAAGTTGGAATCTGAAGTTTCATCCTACAAGGACGACCCTCGGCTACCTTGCGATATAGCTCTAAAGAAAATGGTTGCATTATCAGAAAAGATGGAACGTACAGTTTATACACTTCTCCGCACGAGGGATTCACTAATGCGAAATTGCAAGGAGTTTCATATTCCTGTAGAATGGATGCTTGATAATGGAATTATTGGCAAGatAAAACTAGGGTCAGTTAAATTGGCCAAAAAGTATATGAAAAGAGTAGCCATGGAAGTTCAAACAAAGTCAGCATTTGACAAAGATCCAGCAATGGATTACATGGTTCTCCAAGGAGTGAGATTTGCTTTCAGAATCCATCAGTTTGCAGGAGGATTTGATGCAGAAACAATGCATGCATTTGAAGAACTTCGCAATCTTGCTTCTCTACTTAACAAAACATAA	2271	0.3734	MREENSINNPSENKSKVSKFSDQNQPPKLQTTKGTNPNNNHSKPRLWGAHIVKGFSADKKTKQQSTVLTKKQHQTTTSDVANQKNPFVPAQSRVKRSLMGDLSCSQVHPHAFPTHRRQSSTDLFTELDHMRSLLQESKERESKLNAELAECRKNQNEADELVKKVALLEEEKTSLSEQLAVLSRSGGLERQEEVVKGESKDSSMQNLELEVVELRRLNKELHMQKRNLTCRLSSMESQLSCSPNSSESDIVAKFKAEASLLRLTNEDLSKQVEGLQTSRLNEVEELAYLRWVNSCLRTELKNTCSTLDSDKPSSPQSVVSSSGDSISSFSDQSGSANSFNLVKKPKKWSITSESQVECTNSSLIEKNWIESISEGNNRRRHSISGSNSSEEEVIVLNKRRQSNCFDAFDCLKEMEKESMPMPLSIQQSVLEKRALRIPNPPPRPSSCSITSKTKQESSVQVQVQPPPPPPPPPPPMSFASKSNTAMVKRAPQVVELYHSLMKRDCRRDSSNGGLSDAPDVADVRSSMIGEIENRSSHLLAIKADIETQGEFVNSLIREVNNAVYENIDDVVAFVKWLDDELGFLVDERAVLKHFDWPEKKADTLREASFGYQDLKKLESEVSSYKDDPRLPCDIALKKMVALSEKMERTVYTLLRTRDSLMRNCKEFHIPVEWMLDNGIIGKIKLGSVKLAKKYMKRVAMEVQTKSAFDKDPAMDYMVLQGVRFAFRIHQFAGGFDAETMHAFEELRNLASLLNKT	756

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu01g00529	756	Coils	Coil	127	185	-	-
	Tsu01g00529	756	MobiDBLite	consensus disorder prediction	446	461	-	-
	Tsu01g00529	756	Coils	Coil	204	238	-	-
	Tsu01g00529	756	MobiDBLite	consensus disorder prediction	436	480	-	-
	Tsu01g00529	756	MobiDBLite	consensus disorder prediction	10	43	-	-
	Tsu01g00529	756	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	465	604	-	-
	Tsu01g00529	756	MobiDBLite	consensus disorder prediction	462	478	-	-
	Tsu01g00529	756	MobiDBLite	consensus disorder prediction	58	87	-	-
	Tsu01g00529	756	MobiDBLite	consensus disorder prediction	304	335	-	-
	Tsu01g00529	756	MobiDBLite	consensus disorder prediction	1	87	-	-
	Tsu01g00529	756	PANTHER	PROTEIN CHUP1, CHLOROPLASTIC-LIKE	1	756	-	-
	Tsu01g00529	756	PANTHER	PROTEIN CHUP1, CHLOROPLASTIC	1	756	IPR040265	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu01g00529	Tsu-Chr1	4636573	4640293	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu01g00529	-		-	mtr:MTR_1g016290	1235.32