Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00527 ATGGCTACAATTCCCATACGCATGTCACCATTCCCTTCATCAACAAAAACCATATTTTTCATCTCAACAAACAAATCaatcaccaccaccaacaaATACAAAACCAAATTATTGCCATTATTATGTTTAAGTTCAAGAAACGGAACAGAGTGCCCTGTTCCATTAGAACAACAACCCATAAACGAGTATCAATCATTGTCAACATCGTTTCCATTTTCATGGGCTTCCGGCGATGTGGTTGAATTCGGCTCACGGCTCTTTGTTGTGGGATTTTCTTTTGCTCTCTTTGTTGGGTTACCTGTAGCTTGGTTTGGTACTGTTGGAGCTCAATCTGAACCTGCTAAGAGGATTGTTGGTGCAGCTTCTAGTGGTGTTTTGGCTGTTACGTTTGCGGTTGTTAGGATGTATCTTGGTTGGGCTTATGTTGGTAATCGGTTGCTCAGTGCCACTGTTGAATATGAGGAGACGGGGTGGTATGATGGTCAGATATGGGTGAAGACTCCTGAGGTTTTGGCGCGCGATAGACTCCTGGGATCATTTTCTGTTAAGCCTGTACtcaataaattgaaaatcactTTAATCGGTCTGGCGGCGTGCTTGGGGGCATGTGCTCTAACCTTCAGTAACATTGATGAAAGCTATCTAACATCGAGAGAAACAGGAGTTAGAGCAATACCTGGAGCTTACAATGATGAATCTGCAAGATCATTTGAACCAGATGCATTTTGTGGTGAGCCTGATCTTCAAGAGTAG 753 0.4117 MATIPIRMSPFPSSTKTIFFISTNKSITTTNKYKTKLLPLLCLSSRNGTECPVPLEQQPINEYQSLSTSFPFSWASGDVVEFGSRLFVVGFSFALFVGLPVAWFGTVGAQSEPAKRIVGAASSGVLAVTFAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTPEVLARDRLLGSFSVKPVLNKLKITLIGLAACLGACALTFSNIDESYLTSRETGVRAIPGAYNDESARSFEPDAFCGEPDLQE 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00527 250 PANTHER - 41 248 IPR009631 -
Tsu01g00527 250 PANTHER OS05G0539900 PROTEIN 41 248 - -
Tsu01g00527 250 Pfam Conserved in the green lineage and diatoms 27 51 194 IPR009631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00527 Tsu-Chr1 4619684 4622902 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00527 - - lja:Lj5g3v0391640.2 323.939