Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00523 ATGTCTTCGTCTCCTTCTTGTTCCGCCGCTAACCACGCTCTTATGCGCAATCGCATTCTCTCCACCAACCTTTACTTCGATGTGCCACCGTTCAAGGTTCCGCTTATCTACTCCAACTCCTACGACATTTCCTTTCTCGGCATAGAGAAACTgCATCCGTTTGATTCGTCTAAATGGGGAAGAATTTGTAATTTCCTTGTTTCTTTTGGTGTTCTGGATAACAATCGTATTGTTGAGCCTCTTGAAGCTTCTAAAGATGATCTTCTTGTGgtACACTCAGAATCATACTTGAATAGTCTGAAGGAAAGTTCGAATGTTGCCAAGATAATCGAGGTCCCTCCTGTGGCATTATTTCCCAATTGTCTTGTGCAACATAAAGTTCTTTTCCCATTTAGGAAACAGGTTGGAGGAACTATATTGGCCGCAAAACTTGCAAAGGAGAGAGGATGGGCCATTAATGTGGGAGGAGGTTTTCATCACTGTTCTGCAGAAAATGGTGGTGGATTTTGTGCTTATGCAGATATTTCTCTATGCATCCACTTCGCTTTTGTTCAGTTGAACATATCGAGGGTGATGATTATTGATCTTGATGCACATCAAGGAAATGGTCACGAAATTGACTTCGCCGATGATAACCGGGTCTACATTCTGGATATGTATAACCCTGGAATATATCCTTTGGATTACGAGGCAAGAAATTACATAAATCAGAAAGTTGAAGTGAAGAGTGGGACTCGTACAGAAGAGTACCTGCTGAAATTAGATGAAGCACTTGAGGTTGCTGGGCGAAGGTTTGACCCTGAGTTGTTAGTTTATAATGCTGGAACTGACATCCTAGAAGGTGACCCTTTAGGAAGGTTGAAGATTAGTCCTGATGGAATTGCTCTTAGAGATGAAAAAGTTTTTCGGTTTGCTCGAGAGAAGAACATTCCTATTGTCATGCTCACTTCAGGTGGATACATGAAGTCCAGTGCTAGAGTCATTGCAGATTCAATAGCCAATCTCGAGAAGAAATGCTTGATAGAAACGAGTGGAGGTTCAAAGGATGCTTAG 1053 0.4179 MSSSPSCSAANHALMRNRILSTNLYFDVPPFKVPLIYSNSYDISFLGIEKLHPFDSSKWGRICNFLVSFGVLDNNRIVEPLEASKDDLLVVHSESYLNSLKESSNVAKIIEVPPVALFPNCLVQHKVLFPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAENGGGFCAYADISLCIHFAFVQLNISRVMIIDLDAHQGNGHEIDFADDNRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTRTEEYLLKLDEALEVAGRRFDPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKNIPIVMLTSGGYMKSSARVIADSIANLEKKCLIETSGGSKDA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00523 350 CDD HDAC_classIV 52 335 IPR044150 GO:0004407|GO:0016575
Tsu01g00523 350 PANTHER HISTONE DEACETYLASE 11 8 344 - -
Tsu01g00523 350 Gene3D Histone deacetylase domain 33 347 IPR037138 -
Tsu01g00523 350 PANTHER HISTONE DEACETYLASE 11 8 344 - -
Tsu01g00523 350 SUPERFAMILY Arginase/deacetylase 30 332 IPR023696 -
Tsu01g00523 350 PRINTS Histone deacetylase superfamily signature 190 205 IPR000286 -
Tsu01g00523 350 PRINTS Histone deacetylase superfamily signature 156 179 IPR000286 -
Tsu01g00523 350 PRINTS Histone deacetylase superfamily signature 267 277 IPR000286 -
Tsu01g00523 350 Pfam Histone deacetylase domain 52 331 IPR023801 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00523 K11418 - gmx:100781276 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00523 01 4600316 4604545 Tsu01g00523 01 4600316 4604545 ECH