Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00521 ATGGCTGCACAATTATCCCACCATAATATTCAAGGTCTAACACAAGAAGAATTCAAAGAACTCGAaccaatcataaaaaaataccaCATATTAGAACCAACACCAAACACATGTACATCAATCATAACCTACAAAATTGAAGCACCATCAAACATAGTGTGGCCATTTGTTAGAAGCTTTGAGAATCcacaaaaatacaaacattTTGTCAAAGGTTGTAACATGAAAGGGGACGGAAATGTTGGAAGTATAAGAGAAGTGACTGTTGTTTCGGGTTTACCAGCTTCAACGAGCACAGAAAGATTAGAGATTTTGGATGATGAAAAACATGTACTAAGTTTTAGAGTTGTTGGTGGCGAACACCGTCTTCAAAACTATCGATCGGTCACTTCGGTTAATGAATTTGTCAACAATGAAGGTAAGGTTTATACTATTGTTTTGGAATCTTATATTGTTGATATTCCACATGGGAACACTGAAGAAGATACCAAGATGTTTGTTGACACTGTTGTCAAGCTTAATCTTCAAAAACTTGGAGTTGTTGCTATGAGTTCATGTTCATCCATGCATGGACAATAA 579 0.342 MAAQLSHHNIQGLTQEEFKELEPIIKKYHILEPTPNTCTSIITYKIEAPSNIVWPFVRSFENPQKYKHFVKGCNMKGDGNVGSIREVTVVSGLPASTSTERLEILDDEKHVLSFRVVGGEHRLQNYRSVTSVNEFVNNEGKVYTIVLESYIVDIPHGNTEEDTKMFVDTVVKLNLQKLGVVAMSSCSSMHGQ 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00521 192 PANTHER - 15 191 - -
Tsu01g00521 192 CDD PYR_PYL_RCAR_like 45 178 - -
Tsu01g00521 192 Gene3D - 2 191 IPR023393 -
Tsu01g00521 192 Pfam Polyketide cyclase / dehydrase and lipid transport 45 178 IPR019587 -
Tsu01g00521 192 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 15 191 - -
Tsu01g00521 192 SUPERFAMILY Bet v1-like 38 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00521 Tsu-Chr1 4574636 4575232 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00521 K14496 - gmx:100778183 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00521 01 4574636 4575232 Tsu01g00521 01 4574636 4575232 ECH