Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00516 ATGCTTCACAACACCATCACTTCCTTCAACAATTCCTCAATTCCAGAACAAATGAAccaaaatttgtcaaatcaACTTCAACCTAACTACCAACTAATGCTCAAAGAATCAATCAACCGTTTCTTAACTGAATACCGAAATGGAGCTACCAATTTCACCGATTTCAGCTTAATCTTTTCCCGCACGCTTCATAGTACTCCAGACCCACCAATTCCAATTGTGTGGTTCTACTCAGCGCTTGAATTTCACACTAATAGGTTGGGAATGGGAAAAGAAGCTTCTGGAACTTCGGTGATGGCGGTTAAGGGTCTGTTTCAGCTGTTGGTTTCGTGCTCTGACGGAAGTGTTTCGATGAAGAGGATCGGTGTTCTTGGGCCTTTGGTGTTTGAGATTTGCCGTTTGATGGCTCATGAGAAAGAAGTGATGAAGAGTGAAATTGAGGGTTTGGTGGAAGGGGTTGTTAGTTATTGTAGTATTTTTTGTATGAAGAGTGAAGTTGAGGTTTTAGGTGGTGATGGGATTGTGGTTTTGGAGAAGGATTTTGTGGATTTGATTCCGGTTTGGTTGGTTGGTTGTGATGATGGTAGTCGTGAGTTCGGGGTTGGTGATTGTTTGAAGGGGTTTTTCCCTTTGGTGAGCGATCAGATTCGAAAGCGAATTGAGATGGGTTGTGAGGTTGGTTATTTGGCTGGGGTTGTTATGTTTGAAGCTCTTTTGTTgaaattgtgtttgatttttgatGCGGGGATCACACTAGAGGAAAAGGAGAAGAAGTTGCAAGCCTCCTCAGCTCAAATCATGACAGGGTTTCAGAATTTTTACTTTTTGGATACACTTTTCAGGATGATGTTGGAGCCAGCTTTGCCAGTGATTTCCTTGCTGGGTTCTGAAAACGAAGTTCTGTTAAAAGAAGTCATGTACAATTCTGTGATGATGATGGATTATTCATTCATCAATGGTCAAGCCGGAGTTTCACTGTATGCCAACAGCCTGAAAGATTTTGCTATTAATTGGTTGTTCGTTGCTGAGTTAGCTATACAGTCTGCTAGGGAAAATGGTGATCAGGGGAAAGCTACTTCTTATGTAAATGCCTTTTGTAGGTCCTGCATTCCCATTCAATTGATCAACTGGGTTACTAGTCAAAGTGGCATAGACAGAAAGATCGGCAGACCATATGTTTCCAGTCCCATAGATCTTATAAAATGGCTTCTAGTCGTTGAGGATCACGGATTGGTGATATTTGGTTGTGGAATTGCCAAGCATCGTGCAAAGGCTTTCCTTTTCACTTCAAGAACTGAGTACATGCCTCCAGTAGTCAAACCTCACTTTTTAAATTCTACACATGGAGGGTCCGTGGCAGATAGAGTTTGTGGTGGTGATGTAGAGATGCATGATACTGTGGACACCAGAAGTTTGTCTGGTGATGATAAAATGAACACAGCCACCCCTACTGATGGAACTAGAAAACGCAAAGAAGGAATTGAAGATGATACAAAAGCACAGCTGAAGTATATGAGATGCCAGTTTCACGAGAATTCAGTGAGAGAAAACTCGTTAATATTCAGGCAACAGTGA 1575 0.4102 MLHNTITSFNNSSIPEQMNQNLSNQLQPNYQLMLKESINRFLTEYRNGATNFTDFSLIFSRTLHSTPDPPIPIVWFYSALEFHTNRLGMGKEASGTSVMAVKGLFQLLVSCSDGSVSMKRIGVLGPLVFEICRLMAHEKEVMKSEIEGLVEGVVSYCSIFCMKSEVEVLGGDGIVVLEKDFVDLIPVWLVGCDDGSREFGVGDCLKGFFPLVSDQIRKRIEMGCEVGYLAGVVMFEALLLKLCLIFDAGITLEEKEKKLQASSAQIMTGFQNFYFLDTLFRMMLEPALPVISLLGSENEVLLKEVMYNSVMMMDYSFINGQAGVSLYANSLKDFAINWLFVAELAIQSARENGDQGKATSYVNAFCRSCIPIQLINWVTSQSGIDRKIGRPYVSSPIDLIKWLLVVEDHGLVIFGCGIAKHRAKAFLFTSRTEYMPPVVKPHFLNSTHGGSVADRVCGGDVEMHDTVDTRSLSGDDKMNTATPTDGTRKRKEGIEDDTKAQLKYMRCQFHENSVRENSLIFRQQ 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00516 524 MobiDBLite consensus disorder prediction 468 494 - -
Tsu01g00516 524 PANTHER OS01G0600300 PROTEIN 18 522 - -
Tsu01g00516 524 PANTHER SNF2 DOMAIN PROTEIN 18 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00516 Tsu-Chr1 4521759 4525585 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00516 - - mtr:MTR_1g016740 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00516 01 4521759 4525585 Tsu01g00516 01 4521759 4525585 ECH