Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00491 ATGAAGGAAGATGAAGGTGATGATAAGAAAATCAGCGATGAGAAAATTCAAGATATTAAGCTTTGGGGAATTTTCCTCTTCGGCTTAATTGGCGCTACCGCCACCAGTTTCGCCCTGTCCAGGTCGAAAGTCAGTTATTTTCGATCAGCTTTTCAAGAAGAAGCATGGAAGAGGTACAATAAGCGACTGCAAGAGGAGTATGAGGAAGAGATGGAAAGAGTGgaaagaATAAGGCGTATGCAAAATGTGTTTAATAAAGAAAGGGATAAGTATAGAAGAAATTACGAGAATTGGAAGGAAAATGGTTCTGGTACATATCATCAGCATTTACAAAGGGATGATTGGTATTGGAAGGCTGAACAAACCTTCAGACACCAGTGGAACCATTACCGAGACACCCCAAGGGAAAACGGAAgcataaataattcatcattATCACACCACTACTCGGTTTTGGGTCTCGACAGGTCCAGAACAACACCATATACAGATGCTGAGATCAAgACAGCATTTAGGACCAAGGCAAAGCAGTATCATCCTGACCAGAACCAGGAGGATAGAGTGGCTGCTGAGGCTAAGTTCAAAGAAGTAATGGGTTCATATGAGGCCATACAACAACAAAGAAAGAATCATAGTCTGTTGTGCAAAGATAGACATGTAAAACAAGCTCATGATGTACATTCTGAAATGATTGTTAACAAAATCAACCCTGGTGACTCACGTTATCATCTAGTCTATGGCCATTGCATCCTCGGACAATTTAAACAAGCCATTGCGTTGTTTAGAAGAGGTGAGTCAGTTACTGAAGGAGAGGTGAAAGATGCTAAAAGTGTAGTAGCTGTGATGGTAAAAGGTGGTGTTAGACCTAGTCTTGCTAGTTATATCTCAGTGGTTGATGAACTTTACAAAGGTGAAAAAGTTAATAAGATTGCAGCAAAGGCGGAAACGTGGCTACCTAACCAACCTTACATTGAATATTAG 981 0.3986 MKEDEGDDKKISDEKIQDIKLWGIFLFGLIGATATSFALSRSKVSYFRSAFQEEAWKRYNKRLQEEYEEEMERVERIRRMQNVFNKERDKYRRNYENWKENGSGTYHQHLQRDDWYWKAEQTFRHQWNHYRDTPRENGSINNSSLSHHYSVLGLDRSRTTPYTDAEIKTAFRTKAKQYHPDQNQEDRVAAEAKFKEVMGSYEAIQQQRKNHSLLCKDRHVKQAHDVHSEMIVNKINPGDSRYHLVYGHCILGQFKQAIALFRRGESVTEGEVKDAKSVVAVMVKGGVRPSLASYISVVDELYKGEKVNKIAAKAETWLPNQPYIEY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00491 326 CDD DnaJ 148 197 IPR001623 -
Tsu01g00491 326 Gene3D Tetratricopeptide repeat domain 213 321 IPR011990 GO:0005515
Tsu01g00491 326 ProSiteProfiles dnaJ domain profile. 147 228 IPR001623 -
Tsu01g00491 326 PANTHER HEAT SHOCK PROTEIN-BINDING PROTEIN 4 213 - -
Tsu01g00491 326 SUPERFAMILY Chaperone J-domain 145 209 IPR036869 -
Tsu01g00491 326 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 213 - -
Tsu01g00491 326 Coils Coil 53 101 - -
Tsu01g00491 326 Pfam DnaJ domain 148 209 IPR001623 -
Tsu01g00491 326 SMART dnaj_3 146 209 IPR001623 -
Tsu01g00491 326 Gene3D DnaJ domain 122 212 IPR036869 -
Tsu01g00491 326 PRINTS DnaJ domain signature 171 186 IPR001623 -
Tsu01g00491 326 PRINTS DnaJ domain signature 189 209 IPR001623 -
Tsu01g00491 326 PRINTS DnaJ domain signature 149 167 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00491 Tsu-Chr1 4252217 4258047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00491 - - gmx:100804936 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00491 01 4252217 4258047 Tsu01g00491 01 4252217 4258047 ECH
Tsu01g00491 01 4252217 4258047 Tsu07g00843 07 6908990 6913177 PCT