Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00405 ATGGAGGAAGTTGATAACAAACCAACCTCCTCAGAATCCTCCTCGAGAAATGTTGAACCAAATTCACTAGCGGAAACTACTCAAGAAAATACTGATATCATAATAACTCCAACAATTAATCAGTCTTCCAATGAAGCTTCCGTCAACTCTTCTGAAATAGAATCAAAGTTAACAAATGCTTCTGATGATCAATCTATAAGAAGAGAAGATGAACATCCTCTCAATGATAAATCAACTTCAACTCCAGAAGAAAAAGTTCAAGAACAAGATGAGTATCTTCCAATAGCCGCAGATTCTGAACCTGAAGCTTTAGAAGATACCTTTAACAGACAACATGATGGTGGTTCAACTGTTACTGCTAGCGGCGGCGAGGATGATAATCATATGGAACTCTCGACATCCTCTTCTGTAACAGAAGGGTTGCAGATTGAGCCTAAAGATTTACCTCGAACCGAAGTTATTGAATCCCCTCAAGAGAATTTAGATTCAACTTCAAATGCTGAAGTTCATGTAACAGAAGGATCTTTAGAAGCTATAGTGAACATGCTGAAGGATGTCGCTGTAGCTAATCAGATGGAACTATCGGCTTCGGATTCTGAAACAAAAGAGTTGGAGAATGATCTCAAAGAACTAAAGGCTATTGTGTCTACAATCAAGGGTTCTGATGTTGCTGTTGACTCGCCTACAATCGCTAAGCAAATTGCTGAAAAAAATACCATAATCGATACAGCATCTCCATTTGAATCTGTTAAGGAAGCTGTTTCTAAGTTCGGAGGAATCGTAGATTGGAAAGCTCATAGAATGATCACCGTCGAGAGACGCAAGCATGTAGAACAAGAGCTTGAAAAAGCGCACGATGAGATTCCGGAGTACAGGAAAAGATCAGAGGTGGCTGAACAACAAAAAGTCCATGCACTTCAGGAGCTTGACAGCACAAAAAGACTAATAGAAGAACTAAAACTGAACCTAGAGAGGGCAAAAACCGAAGAGCGTCAAGCAAAACAAGACTCGGAACTTGCAAAGCTAAGAGTGGAAGAGATGGAGCAAGGTATTGCCGAAGATTCTAGCGTGGCAGCCAAGGCTCAGCTCGAGGTTGCTAAAGCAAGGTATACATCTGCAATTACCGAGTTAACATCGGTGAAAGAGGAGCTAGATGCGTTGCGTGTGGAATACGCTTCCTTAGTTGATGAAAAAGGCGAAGCTATCAACAAAGCCGAAGTAGCTGTTGCTGCATCAAAACAAGTAGAAAAGGCGGTAGAAGATTTGACTATTGAGTTAATTGCCACCAAGGAGACTTTTGAAACGGCACATTCTGCACATATGGAAGCAGAAGAACACAGAATAGGAACAGTCATGGCAAGAGATCAAGATTTTCTCAATTGGGAGATGGAACTTaaacaacaagaacaagaacTAGAAAAACTCAACCAGAAAATTTTGTATTCTAAGGATCTTAAATTTAAACTTAGGAAATCCTATACATTGTTGCTTAATTTGAAAGCCGAATTAAATGCCTATATGGGATCGAAGTCAAACCACAAAGGCGATGAAGGAGTAACGAAAGAGAAACGAGAGAAGAAATCACACAATGAAATACAAGAAGCAATTGCATCAGCCAGAAAAGAACTTGAGGAAATAAAGCTTAACATAGAGAAAGCTACTTCTGAGGTAAGTTACTTAAAGGTGGCTGCAACATCATTAAAATCAGAACTCGAACAAGAGAAATCATCGCTCAATTCAATTAGGCAAAGAGAGGGAATGGCCTCAGTTACAGTTGCATCTATCGAAGCCGAGGTGAACAAAATTAAATCAGACATCACTTTTGTTAATATGAAGGAAAAAGAAGGCAAAGAGACTATCCTTGAACTTCCAAAGAAACTAAAAGAAGCGGACGAAGAGGCAAATAAGGCCAACTTGCTGGCTCAAGAAGCTTGCGAAATGCTTCGGAGAGTAAAGGAGGAAGCAGAACGAGCAAAGGCCGGTGCAATTACAATGAACAGCAGATTACTTGCAGCTCAAAAGGAGATAGAAGCTGCAAGAGCTTCGGAAAGGTTGGCAATACAAGCAATTAAAGCATTGCAAGAGAGCGAATCGGCTAGAAGCAACAAAAATGAAGTGGATCCATCAAATGGTGTGATACTTTCAGTTGAGGAGTACTATAATCTTACAAAACAAGCTCATGATGCAGAAGAAAAGGCCAATGTGAGAGTTGCGACCGCGAATTCTGAGATTGATATAGCTAAGGAGACTGAATTGAAAACATTGGAGAAGTTGAATGAAGTGAACAAAGAAATAGCTGCTAGAAGAGAATCTTTGAAGATTGCAATGGAAAAAGCTGAGAAAGCAAGGGAAGGAAAATTAGGTGCAGAACAAGAATTAAGAAAGTGGAGAGCCGAACATGGACAACGCAGAAAAGAGGGTGAAGTAGGCCAAAAAGTGGTAAACCAGAACACAAGTCATAGCGGTAAACTTAATCAAAATCATAGTGCAACTATTCCTGTAAATTACTTTCCAAGTCCAAATGGATCGCCACCGGATGCAAGAAgtggaaaaaagaagaaaaggtcGTTTTTTCCGcggttttttatgttttttggaAGAAGAAAAGCACATTGA 2616 0.3911 MEEVDNKPTSSESSSRNVEPNSLAETTQENTDIIITPTINQSSNEASVNSSEIESKLTNASDDQSIRREDEHPLNDKSTSTPEEKVQEQDEYLPIAADSEPEALEDTFNRQHDGGSTVTASGGEDDNHMELSTSSSVTEGLQIEPKDLPRTEVIESPQENLDSTSNAEVHVTEGSLEAIVNMLKDVAVANQMELSASDSETKELENDLKELKAIVSTIKGSDVAVDSPTIAKQIAEKNTIIDTASPFESVKEAVSKFGGIVDWKAHRMITVERRKHVEQELEKAHDEIPEYRKRSEVAEQQKVHALQELDSTKRLIEELKLNLERAKTEERQAKQDSELAKLRVEEMEQGIAEDSSVAAKAQLEVAKARYTSAITELTSVKEELDALRVEYASLVDEKGEAINKAEVAVAASKQVEKAVEDLTIELIATKETFETAHSAHMEAEEHRIGTVMARDQDFLNWEMELKQQEQELEKLNQKILYSKDLKFKLRKSYTLLLNLKAELNAYMGSKSNHKGDEGVTKEKREKKSHNEIQEAIASARKELEEIKLNIEKATSEVSYLKVAATSLKSELEQEKSSLNSIRQREGMASVTVASIEAEVNKIKSDITFVNMKEKEGKETILELPKKLKEADEEANKANLLAQEACEMLRRVKEEAERAKAGAITMNSRLLAAQKEIEAARASERLAIQAIKALQESESARSNKNEVDPSNGVILSVEEYYNLTKQAHDAEEKANVRVATANSEIDIAKETELKTLEKLNEVNKEIAARRESLKIAMEKAEKAREGKLGAEQELRKWRAEHGQRRKEGEVGQKVVNQNTSHSGKLNQNHSATIPVNYFPSPNGSPPDARSGKKKKRSFFPRFFMFFGRRKAH 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00405 871 Coils Coil 194 214 - -
Tsu01g00405 871 Coils Coil 564 584 - -
Tsu01g00405 871 Pfam Weak chloroplast movement under blue light 239 803 IPR008545 -
Tsu01g00405 871 Coils Coil 458 485 - -
Tsu01g00405 871 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 220 870 - -
Tsu01g00405 871 Coils Coil 274 345 - -
Tsu01g00405 871 MobiDBLite consensus disorder prediction 110 140 - -
Tsu01g00405 871 MobiDBLite consensus disorder prediction 10 60 - -
Tsu01g00405 871 Coils Coil 755 799 - -
Tsu01g00405 871 MobiDBLite consensus disorder prediction 811 837 - -
Tsu01g00405 871 Coils Coil 627 661 - -
Tsu01g00405 871 MobiDBLite consensus disorder prediction 514 531 - -
Tsu01g00405 871 Coils Coil 529 556 - -
Tsu01g00405 871 Coils Coil 377 397 - -
Tsu01g00405 871 MobiDBLite consensus disorder prediction 797 854 - -
Tsu01g00405 871 MobiDBLite consensus disorder prediction 61 91 - -
Tsu01g00405 871 PANTHER WEB FAMILY PROTEIN-RELATED 220 870 - -
Tsu01g00405 871 MobiDBLite consensus disorder prediction 509 531 - -
Tsu01g00405 871 MobiDBLite consensus disorder prediction 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00405 Tsu-Chr1 3368094 3371999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00405 - - gmx:100779436 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00405 01 3368094 3371999 Tsu01g00405 01 3368094 3371999 ECH
Tsu01g00405 01 3368094 3371999 Tsu07g00957 07 7871039 7876781 PCT