Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00359 atgggtgaAACTGATAACCATAACCACCAAGCACCACCGTCAGTTCAGGCACCGCCACCGGGACCACCACCACAAAATCTGGGACTTTCAAGGGGACCCACTTGGAGTCCAGCTGAACAACTTCTTCAACTTCATTATTGCATCCATTCAAATCCTTCATGGCcTGAAGCATTGCTTTTAGCTTTTCAGCACTACATTGTGATGCTTGGAACAACAGTTCTGATTGCAAGTACTCTTGTACCTCTAATGGGTGGGAATCATGGGGATAAGGCTCGTGTGATTCAGTCATTGTTGTTTATGTCTGGTGTCAACACATTGCTTCATACTTGGTTTGGTTCAAGGCTTCCGGTCATTATGAGTGGATCGCTTGCTTTCATTCTTCCGGTGATGTCGATCATAAATGATTACAATGATCAAACTTTTCCATCTGAGCAAGAGAGGTTTAGATACACAATGAGAACAATTCAAGGATCTCTCGTTGTTTCAGCTTTCGTCAATATCTTCCTTGGATATAGTAGAACATGGGGAAATTTAACAAGGCTGTTTAGTCCCATCGTCATTGTACCTGTGGTATGTGTGGTCGGTCTTGGTCTCTTTTCGAGGGGCTTTCCATTGCTTGCAGATTGTGTGCAGATTGGGCTACCTATGCTCATTCTACTGATCATAACACAACAGTATTTGAAGCGCCTTCATGCTAAGGCTGATCATATACTTGAGAGGTTTGCTTTACTTGTCTGCATTGCCGTTGTTTGGGCTTTTGCCGCTATCCTTACCGTGGCTGGTGCGTACAACAATTCCAAAGCAAAGACTCAAACAAGTTGTCGCACAGATCGCTCGTACCTTATGTCTACTGCTCCTTGGATTAAAGCGCCATTACCATTCCAGTGGGGTACTCCCATATTCAAAGCTAGTCATGTCTTTGGGATGATGGGGGCAGCACTTGTCTCTTCTGCTGAGTCAACCGGTACTTACTTCGCCGCAGCTAGGCTTTCTGGTGCAACACCTCCTCCTGCACATGTGCTCAGCCGAAGCATCGGGCTCCAGGGCATTAGTATGCTGCTTGAAGGCATTTTTGGTTGCTGCGTTGGCACTACAGCATCTGTTGAAAATGTCGGTCTACTCGGTCTCACTCATATAGGAAGCAGAAGAGTGGTGCaaatatcaagtggtttcatgattttcttctctatttttGGAAAATTCGGAGCCTTTTTCGCATCAATTCCCTTACCAATATTCGCTGCTATATACTGTGTTTTATTCGGCATTGTTGCTGCTACTGGGATTTCATTTATACAATTTGCAAATAACAACTCCATAAGAAATATCTATGTTTTCGGCTTAACCTTGTTTCTCGGGATCTCAATTCCTCAATATTTTGTCATGAACACTGCACCAAATGGTCATGGTCCTGTTAGAACAAATGGTGGATGGTTTAATGATATATTGAACACCATATTCTCTTCTCCACCAACTGTGGCAATAATAGTTGGGACAGTACTTGACAACACACTTGAAGCCAAGAAAACAGCTGTGGACAGAGGACTTCCATGGTGGGTTCCTTTCCAGAATAAGAAGGGAGATGTTCGAAATGAAGAATTTTACCGCTTTCCTCTCAGGTTAACTGAATATATTCCTACTAGATTTCTCTAG 1653 0.4253 MGETDNHNHQAPPSVQAPPPGPPPQNLGLSRGPTWSPAEQLLQLHYCIHSNPSWPEALLLAFQHYIVMLGTTVLIASTLVPLMGGNHGDKARVIQSLLFMSGVNTLLHTWFGSRLPVIMSGSLAFILPVMSIINDYNDQTFPSEQERFRYTMRTIQGSLVVSAFVNIFLGYSRTWGNLTRLFSPIVIVPVVCVVGLGLFSRGFPLLADCVQIGLPMLILLIITQQYLKRLHAKADHILERFALLVCIAVVWAFAAILTVAGAYNNSKAKTQTSCRTDRSYLMSTAPWIKAPLPFQWGTPIFKASHVFGMMGAALVSSAESTGTYFAAARLSGATPPPAHVLSRSIGLQGISMLLEGIFGCCVGTTASVENVGLLGLTHIGSRRVVQISSGFMIFFSIFGKFGAFFASIPLPIFAAIYCVLFGIVAATGISFIQFANNNSIRNIYVFGLTLFLGISIPQYFVMNTAPNGHGPVRTNGGWFNDILNTIFSSPPTVAIIVGTVLDNTLEAKKTAVDRGLPWWVPFQNKKGDVRNEEFYRFPLRLTEYIPTRFL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00359 550 MobiDBLite consensus disorder prediction 1 32 - -
Tsu01g00359 550 Pfam Permease family 57 460 IPR006043 GO:0016020|GO:0022857|GO:0055085
Tsu01g00359 550 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 3 9 548 IPR029943 -
Tsu01g00359 550 MobiDBLite consensus disorder prediction 13 27 - -
Tsu01g00359 550 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 9 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00359 Tsu-Chr1 3025954 3030538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00359 37 546 Organic Solute Cotransporters AT2G34190 57.647 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00359 - - gmx:100777184 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00359 01 3025954 3030538 Tsu01g00359 01 3025954 3030538 ECH