Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00329 ATGGAGGAGTCAGAACTCCAAGACCTAAATTTAGAGTCAGAAGAAacaccaaaacaacaacaacccgACCCGGTTAACGACGACCGTCCTCTTCTCAAACCCATTACAATCTTCGCTTCCGACACCGAAGAACTCGAGAAGAAATTCGCCCCATACGTACGCCATGATGTTTACGGAACAATGGGACGTAGCGAGTTACCGACGAAGGAAAAGTTTTTACTCGGCGTTGCATTGGTTACGCTTGTTCCGGTGAGAGTTATTGCGGGAATGACGATTTTGTTATTGTATTATTTGATTTGTAGGGTTTGTACGTTTTGGTCTGTTCCCAATCGTGAAGATGAACAAGAAGATTATGCGCATATAGTTGGATGGAGAAGGATTGTTATTGTTCAGTGTGGAAAAGCTTTGGCTAGGCTTATGCTttttgttttagggttttattgGATTCGACAATGGCGTCGCGGTGAAAACCCTGACTCCAATGAGGAAAACAAAAGCCAGCCGGAAGAAACGGAAAGACCTGGTGTAATAATATCTAATCATGTATCATACTTGGATATTTTGTATCACGTGTCTATCTCATTCCCAAGTTTTGTTGCTAAGAGATCAGTGGCCAAACTTCCTCTAATTGGTCTCATCAGTAAGTGTCTTGGTTGTATCTACGTTCAGCGGGAGTCAAAGTCATCAGACTTCAAGGGTGTTTCAGCTGTTGTCACTGAAAGAATTCGAGAAGCTCATCGAAATACCTCTGCTCCGATTATGATGTTATTTCCAGAAGGTACAACCTCAAATGGAGAATATCTCCTTCCATTCAAGAGTGGTGGTTTTTTGGCAAGTGCACCAGTACTTCCTGTAATTTTAAACTACCATTACCAGAGATTTAGTCCTGCCTGGGATTCCATTTCTGGGGTGCGTCATGTGATTTTTCTTCTCTGTCAGTTTGTAAATTATATGGAGGTGACAGAGTTACCTACATACTATCCCTCACAACAGGAGAAAGATGATCCCAAACTATATGCAAGTAATGTTAGAAGGTTGATGGCTACTGAGGGTAATATGATACTTTCAGATATTGGGCTGGCTGAGAAACGAATATATCACTCTGCTCTTAATgGCTTGTTTTCTCAATGCTAA 1134 0.4012 MEESELQDLNLESEETPKQQQPDPVNDDRPLLKPITIFASDTEELEKKFAPYVRHDVYGTMGRSELPTKEKFLLGVALVTLVPVRVIAGMTILLLYYLICRVCTFWSVPNREDEQEDYAHIVGWRRIVIVQCGKALARLMLFVLGFYWIRQWRRGENPDSNEENKSQPEETERPGVIISNHVSYLDILYHVSISFPSFVAKRSVAKLPLIGLISKCLGCIYVQRESKSSDFKGVSAVVTERIREAHRNTSAPIMMLFPEGTTSNGEYLLPFKSGGFLASAPVLPVILNYHYQRFSPAWDSISGVRHVIFLLCQFVNYMEVTELPTYYPSQQEKDDPKLYASNVRRLMATEGNMILSDIGLAEKRIYHSALNGLFSQC 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00329 377 Pfam Acyltransferase 163 285 IPR002123 GO:0016746
Tsu01g00329 377 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 18 373 - -
Tsu01g00329 377 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 92 355 - -
Tsu01g00329 377 CDD LPLAT_LPCAT1-like 137 364 IPR045252 GO:0008374
Tsu01g00329 377 PANTHER PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN-RELATED 18 373 - -
Tsu01g00329 377 SMART plsc_2 175 290 IPR002123 GO:0016746
Tsu01g00329 377 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00329 Tsu-Chr1 2679173 2685125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00329 3 376 Acyl Lipid Metabolism Gene Families AT1G80950 62.278 2.59e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00329 K13510 - gmx:100820536 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00329 01 2679173 2685125 Tsu01g00329 01 2679173 2685125 ECH