Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00327 ATGGCGGGTCGAAGAGATGCGTTACTGACAAGAGATAAGAATCATCCAATCACCGCATCTCGAATCGGCGTTGCCGTTTTCATCGGTGTTGTTCTTGGTTGCATCTTCGCTTTCTTCTCACCACAAGGTTTCTTCACTTCCACCTCAACTCCTTCTATTCTCAATCACAagATGGTTTCGTCTGACTGTGAATCGCCGGAACAAGTTAATTTGTTGAAACTGAATATTCAATCAGCTAAAGAGAAGAATTCTGAGCTGAAGAAGGAGGTGAAAGGGTTAATGGAAAGGCTACGTTTGGCTGAGGAAGGAAAAGGTCATGCAAGGGAACAATATGTTGTGCTTGGTGAGAAACACAAGGCTGGTCCTTTTGGTACTGTCAAGGCTCTCAGAACAAACCCTCCTGTAATTCCTGATGAATCAGTGAACCCTAGATTGGCAAAACTCTTAGAGGAAGTTGCTATTTATAAAGAGGTTATTGTTGTTTTGGCTAACACTAATGTGTTGGAAATGTTGCAAGTATGGTTCACCAATATCAAGAAGGTTGGCATCCCTAATTATTTGGTTGTTGCATTGGATGACAGAATCGAAGAGTTTTGTAAGTCCAATGATGTTCCTGTCTATAGAAGAGACCCGGATCAGGGTGTTGATTCAGTTGCCAAGTCAGGTGGGAACCATGCTGTCTCCGGATTGAAATTTCGCATTTTGAGAGAATTTCTACAATTGGGCTACAGTGTTCTCCTCTCGGATGTTGATATTGTGTATTTGCAGAACCCCTTTGATTATATTTATAGGGATTCAGATGTGGAGTCAATGACGGATGGTCATAATAATCATACAGCTTATGGTTATAACGATGTCTTTGATGAACCTTCAATGGGTTGGGCTAGATATGCTCATACCATGAGAATATGGGTTTATAACTCTGGCTTTTTTTACATAAGACCTACACTTCCTTCAATCGAGCTTTTGGATCGCGTTGCCCATCGGCTTTCTACTGAGAAAGCATGGGATCAAGCAGTTTTTAATGAAGAGCTGTTTTACCCTTCACATCCCGGTTACGATGGACTTCATGCTGCCAAGAGAACAATGGATATGTACCTTTTTATGAATAGTAAGATTCTGTTTAAGACTGTTAGAAAAGATGCTAAACTCAAGAAGTTGAAGCCTGTGATTGTACATGTTAATTATCATCCTGATAAACTTGCAAGGATGAAAGCTGTAGTTGAATTCTATGTCAACGGAAAACAAGATGCGCTGGATAGTTTCCCAGATGGTTCTGAATAG 1284 0.4065 MAGRRDALLTRDKNHPITASRIGVAVFIGVVLGCIFAFFSPQGFFTSTSTPSILNHKMVSSDCESPEQVNLLKLNIQSAKEKNSELKKEVKGLMERLRLAEEGKGHAREQYVVLGEKHKAGPFGTVKALRTNPPVIPDESVNPRLAKLLEEVAIYKEVIVVLANTNVLEMLQVWFTNIKKVGIPNYLVVALDDRIEEFCKSNDVPVYRRDPDQGVDSVAKSGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDYIYRDSDVESMTDGHNNHTAYGYNDVFDEPSMGWARYAHTMRIWVYNSGFFYIRPTLPSIELLDRVAHRLSTEKAWDQAVFNEELFYPSHPGYDGLHAAKRTMDMYLFMNSKILFKTVRKDAKLKKLKPVIVHVNYHPDKLARMKAVVEFYVNGKQDALDSFPDGSE 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00327 427 SUPERFAMILY Nucleotide-diphospho-sugar transferases 159 366 IPR029044 -
Tsu01g00327 427 Pfam Nucleotide-diphospho-sugar transferase 183 404 IPR005069 -
Tsu01g00327 427 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Tsu01g00327 427 Coils Coil 69 103 - -
Tsu01g00327 427 PANTHER GLYCOSYLTRANSFERASE 1 427 - -
Tsu01g00327 427 PANTHER ARABINOSYLTRANSFERASE RRA3 1 427 IPR044290 GO:0016757|GO:0080147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00327 Tsu-Chr1 2664290 2666802 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00327 K20783 - gmx:100804935 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00327 01 2664290 2666802 Tsu01g00327 01 2664290 2666802 ECH