Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00325 ATGAATCTGAATTATTGTGTTTATAAAATGCCATTCAATACTTACTTTTCGAGGTTTGGAAAATATTTGGGGAAAGAAAGGGGAATTCAGGATTCTGCTGAAATTCTCATTGGACAAGGAAAATTGTGGTTTGGTAGTTCTAAGTTTTTTCATTCTGTCAATAAATTAAGTTCAGATTGTGTGGAGGCGACCCTGTTTTTTCGTCCAGGGGTTGCCTTAGCTGAAAGACCTGAATTTGTTGGTAAAAGGAGAACATTGTCGGTAGTTGATACGCTATCTAGAACTTTTTCGGTTCCGTCTGTATCAGGGTCTTTGATTCAGGTTTGTGGATATCATATTGATTGTGCTCTTTCTGGACCCGATAAGTATTTGGCTGGTGGAAAGTTTCAGATTAAAACAATGGCTGCTCGCTTACCTGGGTTTGGTGTTGGTGAGTGCTCTTTAGATAACTTGAATCTGAAACGTGGTCGGTGTTCGCTGTCAACGAAGAATAATAGCAATATTGTTTATCTGAGAACTGGTTTGGGAAATGGTGGAAAAGTGAGCATGTGTTTGAATAACCATCAACGGCCAGATAATGGTGcaatttttggttattttgtttgtaATGTTGCAAAGAGTTGGGGTAGATCTTGGCGTTATACACAGTCGGGATATAGTGACTACCATAGTTCGTCGACATCATGCAACTCTGTTGGCCCCGCTCATGATGTGCCTGTAGACACTTCTGCCCGTGAGGAGAAGCTAACGAATTCGGCAGATTCATCTGAACTGAAAACTCCTTCTGGGAAAACCCTGAAGCTGGTATCTGGATCATGCTACTTGCCTCATCCTGATAAAGAAGACACTGGTGGAGAAGATGCTCATTTTATATGTTCTGAGGAACAAGCAGTAGGGGTGGCAGATGGTGTTGGTGGATGGGCAGATCTTGGTGTTAATTCTGGATTTTACTCTCGCGAACTCATGTCAAATTCAGTGAATGCTATTCGGGAGGAGCCCAAAGGTTCAGTTGACCCTGCTAGGGTGCTGGAAAAAGCATACTCAAGTACAAAAGCTAAGGGTTCATCCACCGCATGCATCATTGCACTAACTGACCAGGGGCTTAATGCTATTAATTTGGGAGACAGCGGGTTTATGGTTATCCGTGATGGTTGCACTATATTCAGGTCTCCTGTGCAGCAACATGATTTCAATTTCACCTATCAGTTGGAATGTAGTAGCAATAGTGATTTACCTAGTTCTGGTCAGGTTTTTACAGTTGCTGTTGCTCCTGGCGATGTCATAGTTGCTGGTACGGATGGACTGTTTGATAACTTGTACAATAATGAGATTACAGCGGTGGTGGTTCACGGCGTTAGAGCTGGCTTAAGCCCTCAGGTCACAGCTCAGAAGATAGCTGCTTTGGCACGTCAACGGGCACTGGATAAAAACAGGCAGACTCCTTTCTCAACCGCTGCTCAAGATGCTGGATTTCGTTACTATGGTGGCAAGCTTGATGATACAACAGTTGTAGTTTCATATATTACTGGTTCTGGAGAAGCGTAA 1545 0.4252 MNLNYCVYKMPFNTYFSRFGKYLGKERGIQDSAEILIGQGKLWFGSSKFFHSVNKLSSDCVEATLFFRPGVALAERPEFVGKRRTLSVVDTLSRTFSVPSVSGSLIQVCGYHIDCALSGPDKYLAGGKFQIKTMAARLPGFGVGECSLDNLNLKRGRCSLSTKNNSNIVYLRTGLGNGGKVSMCLNNHQRPDNGAIFGYFVCNVAKSWGRSWRYTQSGYSDYHSSSTSCNSVGPAHDVPVDTSAREEKLTNSADSSELKTPSGKTLKLVSGSCYLPHPDKEDTGGEDAHFICSEEQAVGVADGVGGWADLGVNSGFYSRELMSNSVNAIREEPKGSVDPARVLEKAYSSTKAKGSSTACIIALTDQGLNAINLGDSGFMVIRDGCTIFRSPVQQHDFNFTYQLECSSNSDLPSSGQVFTVAVAPGDVIVAGTDGLFDNLYNNEITAVVVHGVRAGLSPQVTAQKIAALARQRALDKNRQTPFSTAAQDAGFRYYGGKLDDTTVVVSYITGSGEA 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00325 514 SUPERFAMILY PP2C-like 273 505 IPR036457 -
Tsu01g00325 514 Pfam Stage II sporulation protein E (SpoIIE) 297 506 IPR001932 -
Tsu01g00325 514 Gene3D - 402 511 IPR036457 -
Tsu01g00325 514 ProSiteProfiles PPM-type phosphatase domain profile. 272 508 IPR001932 -
Tsu01g00325 514 PANTHER PROTEIN PHOSPHATASE 95 513 - -
Tsu01g00325 514 SMART PP2C_SIG_2 281 508 IPR001932 -
Tsu01g00325 514 MobiDBLite consensus disorder prediction 244 263 - -
Tsu01g00325 514 Gene3D - 279 401 IPR036457 -
Tsu01g00325 514 SMART PP2C_4 259 506 IPR001932 -
Tsu01g00325 514 PANTHER PROTEIN PHOSPHATASE 2C 95 513 IPR039123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00325 Tsu-Chr1 2649270 2654690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00325 K17508 - gmx:100805475 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00325 01 2649270 2654690 Tsu01g00325 01 2649270 2654690 ECH