Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00306 ATGGCTATCATAACTCGTCAAGCTAAAGGCCCAACTAGGTTATGGGTAAAGATGACAGCTGTAACTATTTTGGGtctatgttttatttttgtttggactgtgttttcatcttcatcttcttcttctgttaCTTTTCAAAGAGAAAGTTTTGAAGATATTTCAGAACCTGTTTCTTCTTTTTCCAATGCTCATAAAcaaacaccaccaccaccacccaaATCACAAAAACGTGTTCAAGTATCTAAAGATCATAAATTTCATCACAATGATGAGAAAAAGGTTAATGGGTCATCTTCAAATTCTCCTTCCACGCGCCCTCATAAGAAAGAAGTGGCGCGTGAGAAGAAACATGTGCATAAGAAGGAAGATAGTAAAGAGAATGTGAATCAAGAATCATTGGAGAAAGAAGATGAGAGTGAAAAAGAATTGgaagataaagaaaaagaagaagaaggattGGAATTGGATCATGAGAGTGATGATTCAGTTGAATCTGTGGATGGAGATTCTGAGATGTTGGAAGATGGAAATGATgaagagttgaagaaaataAGCAAGGGAAAAGTGAAAGGACCTTTGTTTGAGTCAAATGTTAACTATAGATGGAAAATGTGCAGTACTAGAAGCAAGCATAACTACATTCCTTGTATTGATATTGAAGTTGGTGGTGGAAAGATTCCGGGTTACCGGCATACGGAGAGGAGTTGTCCAAGGACATCCTTCATGTGTATGGTTCCTCTTCCCCTTGAAGGATATGAGTCTCCAGTGCCTTGGCCTGATAGCAAATTGAAGATATTGCGTAAGAATGTTGCACACCCGAAACTAGCTGCATATATAAAAAAGCATCGCTGGTTAGTGGATTCTGGAGAATATCTTACTTTCCCTCAAAACCAGTCCGAATTTTTGGGAGGGGTTCAGCACTATCTTGAGTCCATTGAAGAGATGGTACCGGACATTGAGTGGGGTAAAAATATTCGTGTTGTCCTGGACATTGGATGTACAGATTCAAGCTTTGCATCTGCTCTCCTTGATAAGGATGTTTTAACATTGTCACTTGGCTTGAAAGGTGACCTAGTCGACTTAGCTCAGGTGGCACTCGAGCGTGGCTTCCCAGCCATGGTTAGCCCTTTTGCTAGAAGGAGGCTTCCTTTTCCAAGTCAAGTTTTTGATGCTATACATTGTGCGCGTTGCAGCATATCTTGGCATTCCAATGGAGGTAAGCTTCTACTCGAGATGAATCGGATTCTAAGACCTGGCGGATACTTTATTATGTCAACTAAACATGACagcattgaagaagaagaagCAATGACCGCACTGACAGCATCTATTTGTTGGAATGTTCTGGCACATAAAAGTGATGATGTTGGTGAAGTTGGAGTAAGAATATATCAAAAGCCTGAAGGAAATGACATATATGAattgagaaggaagaagatCCCTCCGATTtgcaaagaaaatgaaaatccCGACGCAGTTTGGCATGTTCCAATCAAGACTTGTTTGCATACTATTCCAATTGGAATTGAACAACACGGGGCAGAGTGGCCCGAGGAATGGCCGAAGAGGCTTGAAACTTATCCCGACTGGATgaacaataaagaaaaattgatcGCTGACACCAACCATTGGAATGCGATTGTTAACAAGTCATATCTAAATGGAATGGGCATTGACTGGACAAATATCAGGAATGTTATGGATATGAAATCCATCTATGGAGGATTGGCTGCAGCTCTATCTAAACATAACGTTTGGGTGATGAATGTAGTCCCTGTTCATGCACCAGATACGCTTCCCATAATTTTCGAACGTGGTTTTTTTGGTGTCTATCACGATTGGTGTGAGTCTTTCGGTACTTACCCAAGAACATATGACCTTCTTCATGCTGATCATTTGTTCTCACGCCTCAAAAACAGGTGCAAGCAACCTGTGTCGATTGTTGTTGAGATGGACCGTATCTTACGGCCAGGAGGGTTGACAATCATACGTGACAAAGTTGAAATCCTAAATCCATTGGAAGAGATATTGAGAAGTCTGCATTGGGAGATCAGAATGACTTTCTACCAGGAAAAAGAGGGTATCATATGTGCACAAAAAACTACTTGGAGACCTTGA 2118 0.3744 MAIITRQAKGPTRLWVKMTAVTILGLCFIFVWTVFSSSSSSSVTFQRESFEDISEPVSSFSNAHKQTPPPPPKSQKRVQVSKDHKFHHNDEKKVNGSSSNSPSTRPHKKEVAREKKHVHKKEDSKENVNQESLEKEDESEKELEDKEKEEEGLELDHESDDSVESVDGDSEMLEDGNDEELKKISKGKVKGPLFESNVNYRWKMCSTRSKHNYIPCIDIEVGGGKIPGYRHTERSCPRTSFMCMVPLPLEGYESPVPWPDSKLKILRKNVAHPKLAAYIKKHRWLVDSGEYLTFPQNQSEFLGGVQHYLESIEEMVPDIEWGKNIRVVLDIGCTDSSFASALLDKDVLTLSLGLKGDLVDLAQVALERGFPAMVSPFARRRLPFPSQVFDAIHCARCSISWHSNGGKLLLEMNRILRPGGYFIMSTKHDSIEEEEAMTALTASICWNVLAHKSDDVGEVGVRIYQKPEGNDIYELRRKKIPPICKENENPDAVWHVPIKTCLHTIPIGIEQHGAEWPEEWPKRLETYPDWMNNKEKLIADTNHWNAIVNKSYLNGMGIDWTNIRNVMDMKSIYGGLAAALSKHNVWVMNVVPVHAPDTLPIIFERGFFGVYHDWCESFGTYPRTYDLLHADHLFSRLKNRCKQPVSIVVEMDRILRPGGLTIIRDKVEILNPLEEILRSLHWEIRMTFYQEKEGIICAQKTTWRP 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00306 705 Gene3D Vaccinia Virus protein VP39 303 473 IPR029063 -
Tsu01g00306 705 MobiDBLite consensus disorder prediction 56 183 - -
Tsu01g00306 705 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 212 700 IPR004159 GO:0008168
Tsu01g00306 705 MobiDBLite consensus disorder prediction 154 175 - -
Tsu01g00306 705 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 553 687 IPR029063 -
Tsu01g00306 705 PANTHER METHYLTRANSFERASE PMT28-RELATED 12 705 - -
Tsu01g00306 705 MobiDBLite consensus disorder prediction 116 153 - -
Tsu01g00306 705 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 12 705 IPR004159 GO:0008168
Tsu01g00306 705 Coils Coil 121 156 - -
Tsu01g00306 705 MobiDBLite consensus disorder prediction 77 94 - -
Tsu01g00306 705 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 297 434 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00306 Tsu-Chr1 2506272 2510805 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00306 - - gmx:100798909 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00306 01 2506272 2510805 Tsu01g00306 01 2506272 2510805 ECH