Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00304 ATGCCTTTCTCTAGAAGCATTCCAATCCCAACCTCTCATTGTTCTCCAGAACCGCGTGCACATTATTTAAACCTCACTTTACATGACGACAAATTCAAACCCTTTCATTTCGTTTCATTCTCTCCCCGTAACCGTTTCTCTCTTTCTCATTGCTTTGCTTCTAGAATCTTCTCCGATGCTCATTCTCCGTGCTTTCTCTCCTTCCCGCCGCCACCTCACTCCTCCGCAGGAGATAGTCGGTTGAAAGCTCAATTTTCAAGGGATGAGATCCACATTGATGCATGTGATGACAGTTCTGGAGGCAATAGTGCCGAACATCCGCGAGAATGGTTATCGTTTCCTGATTATGGACCTAAAACTGATATAGGAAAGCGAATCTTCTGTAACCGGCCACTGAATATGAAGAACATTGTTGCTGTAGGATTTGACATGGATTATACTTTGGCACAATACAGGCCTGAAACTTTTGAATCCCTTGCTTATAAACACACAGTTAAAAAGCTGGTTTATGATTTGAAATACCCTAGCGAGTTACTGAGTTGGTCATTTGATCCAAATTACATGGTTAGAGGTTTGGTTCTTGACAAAAAGAGAGGCAACATCTTGAAGGTAAGATCAAGCAAATTATGTGATCCTTTTGACGGGCCTGATTATGCTCTAATTGATACACTCTTTTCTCTTGCGGAAGCCTACTTGTTTGCACAACTGGTTGATTTTAAGGACAGGAATCCTGGAAAGCTTCCTATGTCTATTGATTATGCTTGTCTCTACAAGGATGTTCGTCATGCTGTAGATTTGTGCCACCGAGATGGAACATTGAAGCAAAAGGTTGCAAAAGATCCCGGAAGgTTTATCAATGAAGACACCTCAATAGTTCCCATGCTTAAAATGCTTAGAGATTCTGGACGAACTACATTTTTGGTGACAAACAGTTTATGGGACTATACAAACGTTGTCATGAATTTCCTCTGTGGATCTAGTGGAGTAAACGGCAGTACCAATATGGACTGGCTTCAATACTTTGATGTCATCATTACTGGAAGTGCAAAGCCAAGCTTTTTTCTTGAGGGAAATCATGCTAACCTGTTCGAGGTTGAGCCTGAGAGTGGAAAGTTACTTAATACAGATAATGGCTCTCCTATGCCTCAGGTGGGTGATATATCAGCAGGGTTATTGATGAAAGAAAAGGACCGTAAGGTTTTCCAGGGAGGCAGCGTCAATCACTTACATAATCTACTTTCAATAGAATCAAGTTCACAGGTTCTATATGTTGGAGATCATATTTATGGAGATATACTACGCAGCAAAAAGGTTCTCGCAGGATGGAGAACAATGTTAGTAATCCCAGAGCTTGAGATGGAGGTTCAACTCCTCTCGGAATTAAGAGATTTTCGCAAGGATCTTCAAATTTTGAGGAGCAAGGATGATTGCATTGCAGATAAAATGCACCATTTGAATCGGTCTCTCAAGTTAGAGAATCCAGATGACCATACCAAGCAGAAATTGAATTCAAAACTTGATGAATTGAAGCTTGAAAGAGAGATAGTGCTATTGAGTCATCAAGAAGCGCTAAGAAAATTACACCAAAAGTTTCATGAGCCATGGGGCCAGCTGATGAAGACTGGTTATCAGAACTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCCTGTCTTTATACAAGCCAAGTATCTAACTTGGGCTTGTTATCTTTAGACAAGTACTATAGACCCAGTGAAGATTTTATGCAACATGAATTTGGCATTTTGGAAAGCTGA 1776 0.4071 MPFSRSIPIPTSHCSPEPRAHYLNLTLHDDKFKPFHFVSFSPRNRFSLSHCFASRIFSDAHSPCFLSFPPPPHSSAGDSRLKAQFSRDEIHIDACDDSSGGNSAEHPREWLSFPDYGPKTDIGKRIFCNRPLNMKNIVAVGFDMDYTLAQYRPETFESLAYKHTVKKLVYDLKYPSELLSWSFDPNYMVRGLVLDKKRGNILKVRSSKLCDPFDGPDYALIDTLFSLAEAYLFAQLVDFKDRNPGKLPMSIDYACLYKDVRHAVDLCHRDGTLKQKVAKDPGRFINEDTSIVPMLKMLRDSGRTTFLVTNSLWDYTNVVMNFLCGSSGVNGSTNMDWLQYFDVIITGSAKPSFFLEGNHANLFEVEPESGKLLNTDNGSPMPQVGDISAGLLMKEKDRKVFQGGSVNHLHNLLSIESSSQVLYVGDHIYGDILRSKKVLAGWRTMLVIPELEMEVQLLSELRDFRKDLQILRSKDDCIADKMHHLNRSLKLENPDDHTKQKLNSKLDELKLEREIVLLSHQEALRKLHQKFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLGLLSLDKYYRPSEDFMQHEFGILES 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00304 591 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 209 591 - -
Tsu01g00304 591 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 19 207 - -
Tsu01g00304 591 Pfam 5' nucleotidase family 216 586 IPR008380 -
Tsu01g00304 591 Pfam 5' nucleotidase family 126 206 IPR008380 -
Tsu01g00304 591 Gene3D - 263 475 IPR023214 -
Tsu01g00304 591 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 19 207 IPR008380 -
Tsu01g00304 591 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 209 591 IPR008380 -
Tsu01g00304 591 SUPERFAMILY HAD-like 124 587 IPR036412 -
Tsu01g00304 591 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 214 467 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00304 Tsu-Chr1 2491467 2498420 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00304 - - gmx:100814787 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00304 01 2491467 2498420 Tsu01g00304 01 2491467 2498420 ECH