Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00285 ATGGGAACATTAGGCAGAGCTATATACAGCGTTGGATTTTGGATTCGTGAAACCGGTCAAGCCATTGATCGCCTCGGTTCTCGTCTCCAGGGAAATTACTACTTTCAAGAACAGCtgtCCAGGCATCGAACTCTGATGAACATATTTGATAAGGCTCCTAGTGTTGATAAGGATGCATTTATTGCCCCAAGTGCCTCCGTCATTGGTGATGTTCATATTGGCAGAGGATCATCTATTTGGTATGGATGTGTCATGAGAGGTGATGTGAACAGCATCAGTGTTGGAAGTGGAACCAACATTCAGGATAACTCCCTGGTGCACGTTGCAAAGTCAAATTTAAGTGGGAAGGTGTTGCCTACGACTATTGGGGATAATGTTACTGTAGGTCATAGTGCGGTTTTACATGGTTGCACTGTTGAGGACAAAGCTTTTGTTGGTATGGGTGCAACTCTACTTGACGGTGTCGTTGTTGAGAAACATGCCATGGTTGCTGCTGGTGCCCTTGTTAGACAGAATTCACGGATTCCAGCTGGAGagGTTTGGGCAGGAAACCCAGCAAAGTTCTTGAGAAAACTCACTGCTGAAGAGATATCATTTATCTCCCAGTCAGCCATCAATTACAGTAACCTTGCACAGGTCCATGCAGCTGAAAATGCCAAGCCTTTTGATGAAATTGAGTTTGAGAAAGTGCTCCGAAAGAAGTTTGCACGGAAAGACGAGGAGTATGACTCAATGTTGGGTGTTGTTCGTGAGATCCCTCCAGAACTCATTCTTCCAGATAATGTCCTACCTGATAAACAAACAAAGGTTTCCACACAATGA 822 0.4428 MGTLGRAIYSVGFWIRETGQAIDRLGSRLQGNYYFQEQLSRHRTLMNIFDKAPSVDKDAFIAPSASVIGDVHIGRGSSIWYGCVMRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDKAFVGMGATLLDGVVVEKHAMVAAGALVRQNSRIPAGEVWAGNPAKFLRKLTAEEISFISQSAINYSNLAQVHAAENAKPFDEIEFEKVLRKKFARKDEEYDSMLGVVREIPPELILPDNVLPDKQTKVSTQ 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00285 273 SUPERFAMILY Trimeric LpxA-like enzymes 47 212 IPR011004 -
Tsu01g00285 273 CDD LbH_gamma_CA_like 54 212 - -
Tsu01g00285 273 PANTHER DYNACTIN SUBUNIT P25 1 269 - -
Tsu01g00285 273 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Tsu01g00285 273 Gene3D Hexapeptide repeat proteins 43 222 - -
Tsu01g00285 273 PANTHER YRDA, PUTATIVE-RELATED 1 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00285 Tsu-Chr1 2352686 2357787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00285 K01726 - jre:108982315 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00285 01 2352686 2357787 Tsu01g00285 01 2352686 2357787 ECH