Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00282 ATGGCAACACTTTCTTGCAACATTTCAATTCGATCAGAGAGATCAAGCTTCCTCCCACATGTgtttccatcttcttctttATCTCAAATTTTCTGCCATCGTTCTTTTTTCCATCACAATACTATATCTTCATATTTTCCCCTCAAAATATCGTGCCGTGCCACTTCAGTTGAATCAGCTTCTGTTGTGGAAAAAACCAAGGTGAAGGATTTTCTTCATATAAATGATTTTGACAAGGACACTATAAAGAAGATCTTGAACAGGGCCATTGAGgtaaaagaattaataaaatcagGGGACAGGACATTTCAACCATTTAAAGGGAAAACATTGGCAATGGTTTTTGCAAAGCCATCATTGAGAACACATGTTTCATTTGAGTCTGGCTTTTCATTGTTGGGTGGACATGCTGTTTATTTAGCACCTGAGGATATTCAAATGGGGTCGAGAGAGGAAACTCGTGATGTTGCTCGTATCTTGTCTCGCTTTACTGACATTGTTATGGCTCGTGTTTTTACTCATGAGGACATACTTACTCTTTCAAAATATGCAACTGTACCAGTCATCAATGGACTGACAGATTACAATCACCCCTGCCAGATAATGGCTGATGCCATTACTGTAATTGAGCATCTTAGTCGGATTGAAGGCATCAAGGTTGCATATGTTGGAGATGGAAACAATGTTGTCCATTCATGGTTGGAGCTGGCAAGTTTATTTCCTATTCACTTCACTTGTGCAACTCCAAAGGGCTATGAACCAGATGCAAAAACAGTCGAGAAAGCACGCCAAGCTGGCATCAGCAAGATTGTGATAACTGATGATCCCAAAGAGGCAGTGAAAGGAGCTGATATTGTTTATACAGATGTTTGGGCAAGTATGGGGCAGAAGGAAGAGGCTCAAAAGCGTCGTTTGATGTTCAAAGGATTTCAGGTAGACCAAAGTCTCATGGATTTAGCTGGCTCAAATGCATTATTCATGCATTGCTTACCAGCAGAAAAAGGAGTGGAGGTAACTGAGGAAGTTATTGAAGGTCCACAGTCAATTATCTTCACGCAAGCTGAGAATCGATTACACGCACAGAATGCTATAATGCTCCATGTGCTTGGCGAATAA 1116 0.3961 MATLSCNISIRSERSSFLPHVFPSSSLSQIFCHRSFFHHNTISSYFPLKISCRATSVESASVVEKTKVKDFLHINDFDKDTIKKILNRAIEVKELIKSGDRTFQPFKGKTLAMVFAKPSLRTHVSFESGFSLLGGHAVYLAPEDIQMGSREETRDVARILSRFTDIVMARVFTHEDILTLSKYATVPVINGLTDYNHPCQIMADAITVIEHLSRIEGIKVAYVGDGNNVVHSWLELASLFPIHFTCATPKGYEPDAKTVEKARQAGISKIVITDDPKEAVKGADIVYTDVWASMGQKEEAQKRRLMFKGFQVDQSLMDLAGSNALFMHCLPAEKGVEVTEEVIEGPQSIIFTQAENRLHAQNAIMLHVLGE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00282 371 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 216 367 IPR006131 GO:0006520|GO:0016597|GO:0016743
Tsu01g00282 371 Gene3D Aspartate/ornithine carbamoyltransferase 69 199 IPR036901 GO:0006520|GO:0016597|GO:0016743
Tsu01g00282 371 TIGRFAM orni_carb_tr: ornithine carbamoyltransferase 69 369 IPR002292 GO:0016743
Tsu01g00282 371 Gene3D Aspartate/ornithine carbamoyltransferase 200 365 IPR036901 GO:0006520|GO:0016597|GO:0016743
Tsu01g00282 371 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 115 134 IPR006130 GO:0006520|GO:0016597|GO:0016743
Tsu01g00282 371 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 334 357 IPR006130 GO:0006520|GO:0016597|GO:0016743
Tsu01g00282 371 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 322 331 IPR006130 GO:0006520|GO:0016597|GO:0016743
Tsu01g00282 371 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 197 208 IPR006130 GO:0006520|GO:0016597|GO:0016743
Tsu01g00282 371 Hamap Ornithine carbamoyltransferase, catabolic [argI]. 68 370 IPR024904 GO:0004585|GO:0006591
Tsu01g00282 371 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, CHLOROPLASTIC-LIKE 48 370 - -
Tsu01g00282 371 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 66 370 IPR036901 GO:0006520|GO:0016597|GO:0016743
Tsu01g00282 371 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 48 370 - -
Tsu01g00282 371 PRINTS Ornithine carbamoyltransferase signature 113 127 IPR002292 GO:0016743
Tsu01g00282 371 PRINTS Ornithine carbamoyltransferase signature 286 296 IPR002292 GO:0016743
Tsu01g00282 371 PRINTS Ornithine carbamoyltransferase signature 186 200 IPR002292 GO:0016743
Tsu01g00282 371 PRINTS Ornithine carbamoyltransferase signature 146 159 IPR002292 GO:0016743
Tsu01g00282 371 PRINTS Ornithine carbamoyltransferase signature 348 359 IPR002292 GO:0016743
Tsu01g00282 371 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 69 210 IPR006132 GO:0006520|GO:0016743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00282 Tsu-Chr1 2331032 2333037 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00282 K00611 - gmx:100796780 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00282 01 2331032 2333037 Tsu01g00282 01 2331032 2333037 ECH