Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00193 ATGGGATCAGTTTGTTCAGCTGGTaatgaagagaaaaataaaaatgatgagATTCAAGAAGTTTCTGTGGGGAAACTTAATAAGTTAAAGAGCTTTGTTAACAGAAATGGAAAttgttattcaaattcaaaGGTTAGTAGTGATCGTGGTCAAAATCAAAAGAAGCAAAAATCTGGATTTTCTAAGGAATTCAAACTAGTCAATGATACCACCAATCTCAATGTAAAAGGCAGAAAACAGGTCTCCCAAAGAGGGTCCTTTCTAGGAAGAGCTGGTGAGAAGGCAGTGGAAGTTCTAGACACACTAGGAAGTAGCATTCCCAAGATAAGCACCAGTGATGGTTTTATCACTGGCATGGCTCctagaagaaataaaatatctatGTTGGCATTTGAAGTAGCTAATACAATTACTAGAGGATCAATTTTGTTTCATTCACTATCTGAAGAAAACATTCAGTTActtaaaaatgagattttacaATCAGAAGGGTTGCAAAAGCTGGTTTCAACTGATACAAAGGAGTTGTTAAGTCTTATTGGCGATGACAAAAGGGAAGAATTCAATGTTTTCTCGCGGGAAGTAGCTAGATTTGGTAATACATGTAAAGATCCTCAGTGGCATAACCTTGATCGATATTTTTCACGATTAGATTTGGATGCCTTGAGCAACAAACAACATAGGTTAGAAGCAGAAAAGACAGTGCAGGACTTGTCCTATCTAGCTCAGAATACTGCGGAATTATACCATGAAATGAATGCATTGGACCGTTTTCAACAAGATTATAACCAAAAGGTTAAGGAGTTGGAGTTCTTAAATCTTCCTCTCAACGgAGAAGGTCTCACAGCTTTTCATAGTGAGCTTAAGCATCAAAGAAAGCTTGTAAAGAGCTTACAAAGGAAATCCCTCTGGTCAAAAAATTTGGAGGAGATCGTTGAAAAGCTTGTTGATATTGCCACACATACACATCAAGCAATTTTTGAATTCCTTGGGAAAAATGCAGGTACAATCGCAGTAAAAAATCGTACGGGGCCTCAACAACTTGGCGAAGCTGGTCTTGCACTGCACTATGCTAACATTATCAATCAGATAAATGTTATAGCATCACGCCCAACCATTCTTCCACCAAATATGAGAGACACGTTGTATAAAGCTTTGCCCAATAATATTAAGAATGCCCTTCCTTCGCGGTTGCAAAACGATGATGTCACAAAAGAGGTCTCCATTGCTCAAGTCAAAGCTGAAATGGATATGATTCTCCAGTGGCTTACTCCATTTGCCACAAATACGACCAAAGCACACCAAGGTTTTGGATGGGTTGGTGAATGGGCAAATGCAAGTGCTATTGAGTTTGGAGAAAATACCGCAACCAAAGAAAGCAATCTTATTCGTCTTCATACACTTCATTACGCCGAAAAACAAAAGATAGATTTTCACATCCTAGAACTATTGGTTCGACTTCACCATTTAGTTACCTTTGTGAGATACAGACACAATCCGACAAGACCAATGTCTAGTACAAGAACTTCTTCTCCCAACAAAGGACTTCATTTTcagaaaaaaatgttacaattCATATCATTGTCTCAATTGTCTGAAGAGGATAGAAGGTTGTTGGAAGAGGTAGCTACAAGGAGATGGATTCCAGGTATCAGCAAAAGTGAGAATCTTGCTGGGGCCAAGAAAACAGAAAACATGGTGTGGCATTTTAGTAACAGTGTTGGGAATTCACCAGCTAAGTGGTTATTTCCTACAAAATTCAGCTTGGATGTTATGGATGGCCTATAA 1788 0.3697 MGSVCSAGNEEKNKNDEIQEVSVGKLNKLKSFVNRNGNCYSNSKVSSDRGQNQKKQKSGFSKEFKLVNDTTNLNVKGRKQVSQRGSFLGRAGEKAVEVLDTLGSSIPKISTSDGFITGMAPRRNKISMLAFEVANTITRGSILFHSLSEENIQLLKNEILQSEGLQKLVSTDTKELLSLIGDDKREEFNVFSREVARFGNTCKDPQWHNLDRYFSRLDLDALSNKQHRLEAEKTVQDLSYLAQNTAELYHEMNALDRFQQDYNQKVKELEFLNLPLNGEGLTAFHSELKHQRKLVKSLQRKSLWSKNLEEIVEKLVDIATHTHQAIFEFLGKNAGTIAVKNRTGPQQLGEAGLALHYANIINQINVIASRPTILPPNMRDTLYKALPNNIKNALPSRLQNDDVTKEVSIAQVKAEMDMILQWLTPFATNTTKAHQGFGWVGEWANASAIEFGENTATKESNLIRLHTLHYAEKQKIDFHILELLVRLHHLVTFVRYRHNPTRPMSSTRTSSPNKGLHFQKKMLQFISLSQLSEEDRRLLEEVATRRWIPGISKSENLAGAKKTENMVWHFSNSVGNSPAKWLFPTKFSLDVMDGL 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00193 595 PANTHER DUF668 FAMILY PROTEIN 1 595 - -
Tsu01g00193 595 MobiDBLite consensus disorder prediction 40 61 - -
Tsu01g00193 595 MobiDBLite consensus disorder prediction 40 54 - -
Tsu01g00193 595 Pfam Domain of unknown function (DUF3475) 129 184 IPR021864 GO:0045927
Tsu01g00193 595 Pfam Protein of unknown function (DUF668) 348 432 IPR007700 GO:0045927
Tsu01g00193 595 PANTHER OS01G0873900 PROTEIN 1 595 IPR045021 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00193 Tsu-Chr1 1498275 1503480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00193 - - gmx:100785193 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00193 01 1498275 1503480 Tsu01g00193 01 1498275 1503480 ECH