Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00192 ATGGATCACCACCGCCAAACACTATCATTATTAATTTCATTCTTACTAACACTATCATTTTCAGGTGTAATTTCAACAACTTTCACATTTGTTAACAATGTAGAATGCTCCGGCAACGGAGCTGCACCGCCAGCGACATTAGCTGAGTTCACTTTAGACGGCTCCGGTGGTCTTGACTTCTTCGACGTTAGTCTCGTTGACGGCTACAACGTTCCTATGATGGTGGCTCCACAGGGTGGCTCCGGCGAGAAGTGTACCACCACGGGTTGCATAGATGATCTTAACGGCGCGTGTCCTTCGGAACTTAGAGTTATGAGTGTTGATGGGAAAGAGGGTGTCGCGTGTAAAAGCGCGTGTGAGGCATTTAACTCGCCGGAGTATTGTTGCAGCGGCGCGTATGGAACTCCTGATACTTGCAAACCTTCGAGTTATTCAGAGTTGTTTAAGAATGCTTGCCCACGCGCTTATAGCTACGCGTATGATGATAAGACAAGTACTTTCACTTGTGCAAATGCAGTAGATTATACTATCACGTTTTGTTCTTCTCCTACCACAAGTCAGAAAGCAACACAAGGGCAAGACACAAAACAGGAAAGTTCTTCTTCCAATGGTAATGGTAATAACTCATCATCAGCTTCACCTCAGCTTAACAACAACAACGACAACACAATGGTGTACGAAGGTGGTTATGATCAAAGTGAAATCTCAAAAGCCGTGTGCAACCATGTGCTCCAATCACAAACTAGTATTGCGTCCATTATTAGTATTACTTTCGTCATTTGCCGGTTATGCCAACTCTTCTAA 804 0.4428 MDHHRQTLSLLISFLLTLSFSGVISTTFTFVNNVECSGNGAAPPATLAEFTLDGSGGLDFFDVSLVDGYNVPMMVAPQGGSGEKCTTTGCIDDLNGACPSELRVMSVDGKEGVACKSACEAFNSPEYCCSGAYGTPDTCKPSSYSELFKNACPRAYSYAYDDKTSTFTCANAVDYTITFCSSPTTSQKATQGQDTKQESSSSNGNGNNSSSASPQLNNNNDNTMVYEGGYDQSEISKAVCNHVLQSQTSIASIISITFVICRLCQLF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00192 267 PRINTS Pathogenesis-related protein signature 59 75 IPR001938 -
Tsu01g00192 267 PRINTS Pathogenesis-related protein signature 171 180 IPR001938 -
Tsu01g00192 267 ProSiteProfiles Thaumatin family profile. 34 180 IPR001938 -
Tsu01g00192 267 PANTHER BNAA02G17480D PROTEIN 33 209 - -
Tsu01g00192 267 Gene3D Thaumatin 21 181 IPR037176 -
Tsu01g00192 267 Pfam Thaumatin family 32 180 IPR001938 -
Tsu01g00192 267 SMART tha2 28 181 IPR001938 -
Tsu01g00192 267 MobiDBLite consensus disorder prediction 184 227 - -
Tsu01g00192 267 SUPERFAMILY Osmotin, thaumatin-like protein 32 181 IPR037176 -
Tsu01g00192 267 PANTHER OS03G0233200 PROTEIN 33 209 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00192 Tsu-Chr1 1491577 1493736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00192 33 200 Receptor kinase-like Gene Family AT5G38280 53.448 1.24e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00192 - - gmx:100787631 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00192 01 1491577 1493736 Tsu01g00192 01 1491577 1493736 ECH