Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00191 ATGAGGAAGTGGACGATCCCTTccgttcttcttcttctctctcttctccttcttttcGCAGATCAAGGTCAAAAGTTTCAAGCGAATGCGGAAGGTAATTCCGATGAGCTTGTAGATCCACCAAAGGTGGAGGATAAGATCGGCGCTGTTCCACATGGACTTTCAACCGATTCAGATGTCGTTAAGAGGGAATCGGAGTCGATCTCGAAGAGATCACTTCGGAGTAACGCGGAGaagtttgaatttcaagccGAAGTGTCAAGACTTATGGATATTATTATCAATTCACTCTATAGTAACAAAGATATTTTCCTTAGGGAACTTATTTCAAATGCTTCTGATGCATTGGACAAGATTAGGTTCCTTTCCCTCACTGATAAGGAAATTTTAGGTGAAGGTGACAACGCCAAGCTTGAAATTCAGATTAAGTTAGATAAGGAAAAGAAAATTCTATCTATTAGAGACAGAGGTATTGGTATGACAAAGGAGGATTTAGTAAAGAATTTGGGTACGATAGCGAAGTCTGGAACTTCAGCCTTTGTTGAGAAAATGCAGACAAGTGGTGATCTCAATTTAATTGGGCAATTTGGAGTTGGATTCTACTCTGTGTATCTTGTGGCCGACTATGTTGAAGTTATTAGCAAGCATAATGATGACAAACAGTATGTTTGGGAATCAAAAGCTGATGGAGCATTTGCAATTTCAGAAGATACATGGAATGAACCACTAGGACGTGGAACAGAGATTAAAATACACCTCAAAGAAGAGGCCGGGGAATACGTCGAAGAGTTTAAGCTCAAAGAATTGGTGAAGAGATACTCTGAATTTATTAATTTCCCTATCTATATTTGGGCAAGCAAAGAGGTTGATGTGGAGGTTCCTGCTGATGAAGACGAGTCCAGTGAGGAAGAGGAGTCAACTGAAAGTACCTCCAAGGAAGaaggtgaagaagaagatgctgaaaaagatgaagatgaagagaaaaaGCCTAAAACAAAGACTGTGAAGGAAACAACTTACGAGTGGGAACTTTTAAATGACGTGAAAGCTATATGGCTGAGGAATCCAAAGGAAGTTACAGAAGAAGAGTACACCAAATTCTACCACTCTCTTGCCAAGGATTTTAGCGATGATAAACCTTTAGCATGGAGCCACTTTACTGCTGAAGGTGATGTCGAGTTCAAAGCAGTCCTTTATGTGCCACCTAAAGCACCTCAGGACTTATATGAGAGTTATTACAATTCAAACAAATCCAACCTGAAGCTGTATGTTAGACGGGTGTTCATTTCAGATGAATTTGATGAACTGTTGCCCAAGTATTTGAGCTTTTTGACCGGCCTTGTTGATTCTGACACTTTACCACTGAATGTATCACGAGAAATGCTTCAACAACACAGTAGTCTGAAGACGATAAAAAAGAAACTTATTAGGAAAGCCCTTGATATGATCCGTAAGCTTGCCGAAGAGGATCCTGATGAGTCCACtgataaagaaaagaaagAAGAGGCATCCTCTGAAATTGAAGAGAAGAGAGGTCAATACACTAAGTTCTGGAATGCATTTGGAAAATCCATTAAACTTGGTATCATTGAGGATGCCACCAACAGAAATCGATTGGCAAAACTACTAAGATTTGAGACCACCAAGTCCGAGGGTAAATTGACATCTCTTGATCAGTACATATCTAGAATGAAAGCTGGACAAAAAGATATCTTTTACATAACTGGAACCAGCAAAGAACAACTGGAAAATTCTCCATTCCTTGAGCGGCTTAAGAAGAAAAACTTTGAGGTTATTTTCTTCACGGATCCAGTGGACGAATACTTGATGCAATACCTGATGGATTATGAAGACAAGAAGTTCCAAAATGTGTCCAAGGAAGGTCTGAAACTTGGGAAGGATTCAAAAGACAAGGAACTAAAGGAATCCTTCAAGGATCTAACTAAGTGGTGGAAAAATTCCCTTTCAAACGATAATGTTGATGATGTGAAGATATCCAACCGATTGGACAACACTCCTTGTGTAGTTGTGACATCAAAATTTGGTTGGAGTGCAAACATGGAGAGAATCATGCAGTCTCAAACTTTGTCAGACGCTAGCAAGCAAGCATACATGCGCGGCAAGAGGGTTCTTGAGATCAATCCTAGACACCCTATTATCAAGGAACTCCGGGAGAGAGTAGTGAAGAACCCTGAGGATGAGAGCGTGAAGCAAACGGCACAGCTGATGTACCAGACTGCACTCTTCGAAAGTGGTTTCTTGTTGAATGATCCCAAGGATTTTGCTTCTAGAATTTATGATTCAGTGAAGACTAGCTTAGACATCAGTCCTGATGCAacagttgaagaagaagatgagaccGAAGTTGACACTGAAAGTGAAACAAAAGAAGAAGCTGCTACTTCAAATCAAGCTGATGAGGTAAATGATGATGTCAAGGACGAGTTGTAG 2451 0.3823 MRKWTIPSVLLLLSLLLLFADQGQKFQANAEGNSDELVDPPKVEDKIGAVPHGLSTDSDVVKRESESISKRSLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEILGEGDNAKLEIQIKLDKEKKILSIRDRGIGMTKEDLVKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKIHLKEEAGEYVEEFKLKELVKRYSEFINFPIYIWASKEVDVEVPADEDESSEEEESTESTSKEEGEEEDAEKDEDEEKKPKTKTVKETTYEWELLNDVKAIWLRNPKEVTEEEYTKFYHSLAKDFSDDKPLAWSHFTAEGDVEFKAVLYVPPKAPQDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLTGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDESTDKEKKEEASSEIEEKRGQYTKFWNAFGKSIKLGIIEDATNRNRLAKLLRFETTKSEGKLTSLDQYISRMKAGQKDIFYITGTSKEQLENSPFLERLKKKNFEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKDKELKESFKDLTKWWKNSLSNDNVDDVKISNRLDNTPCVVVTSKFGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKNPEDESVKQTAQLMYQTALFESGFLLNDPKDFASRIYDSVKTSLDISPDATVEEEDETEVDTESETKEEAATSNQADEVNDDVKDEL 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00191 816 MobiDBLite consensus disorder prediction 778 793 - -
Tsu01g00191 816 MobiDBLite consensus disorder prediction 794 809 - -
Tsu01g00191 816 Gene3D - 65 300 IPR036890 -
Tsu01g00191 816 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 19 802 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Tsu01g00191 816 Gene3D - 540 627 - -
Tsu01g00191 816 Pfam Hsp90 protein 259 799 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Tsu01g00191 816 MobiDBLite consensus disorder prediction 293 323 - -
Tsu01g00191 816 ProSitePatterns Heat shock hsp90 proteins family signature. 98 107 IPR019805 GO:0005524|GO:0006457|GO:0051082
Tsu01g00191 816 PRINTS 90kDa heat shock protein signature 150 167 IPR020575 -
Tsu01g00191 816 PRINTS 90kDa heat shock protein signature 263 281 IPR020575 -
Tsu01g00191 816 PRINTS 90kDa heat shock protein signature 193 215 IPR020575 -
Tsu01g00191 816 PRINTS 90kDa heat shock protein signature 78 98 IPR020575 -
Tsu01g00191 816 PRINTS 90kDa heat shock protein signature 99 121 IPR020575 -
Tsu01g00191 816 PRINTS 90kDa heat shock protein signature 168 185 IPR020575 -
Tsu01g00191 816 PRINTS 90kDa heat shock protein signature 245 262 IPR020575 -
Tsu01g00191 816 SMART HKATPase_4 100 257 IPR003594 -
Tsu01g00191 816 Hamap Chaperone protein HtpG [htpG]. 75 770 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Tsu01g00191 816 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 101 256 IPR003594 -
Tsu01g00191 816 SUPERFAMILY HSP90 C-terminal domain 646 768 IPR037196 -
Tsu01g00191 816 Gene3D - 347 539 - -
Tsu01g00191 816 MobiDBLite consensus disorder prediction 487 507 - -
Tsu01g00191 816 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 78 287 IPR036890 -
Tsu01g00191 816 MobiDBLite consensus disorder prediction 775 816 - -
Tsu01g00191 816 PIRSF HSP90_HTPG 54 813 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Tsu01g00191 816 MobiDBLite consensus disorder prediction 293 334 - -
Tsu01g00191 816 PANTHER BNAA08G14800D PROTEIN 19 802 - -
Tsu01g00191 816 CDD HATPase_Hsp90-like 87 277 - -
Tsu01g00191 816 Gene3D - 634 780 IPR037196 -
Tsu01g00191 816 SUPERFAMILY Ribosomal protein S5 domain 2-like 348 627 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00191 Tsu-Chr1 1480537 1485438 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00191 K09487 - gmx:100779976 1352.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00191 01 1480537 1485438 Tsu01g00191 01 1480537 1485438 ECH