Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00183 ATGATTCCAAATGACTTCCACGACGAAGACAAATGGCTCGCCGAGGGAATCGCCGCCATTCAACACAACGCATTCTTCATGCATCGCGCTCTCGATGACAATAATCTCAGAGATTCACTCAAATACTCTGCGCAGATGCTATCTGAACTTCGAACTTCTAGGCTTTCACCTCATAAATATTATGAACTGTATATGAGAGCCTTTGATGAGCTACGGCGGTTGGAGATGTTTTTCAAAGACGAAAGTAGACACGGTGTTTCAATAGTTGATCTTTATGAGCTTGTTCAACACGCTGGAAATATACTGCCTAGATTGTATCTTCTTTGCACGGTAGGATCTGTTTACCTTAGATGTAAGGATACTCCTGTAAGGGACGTTCTTAAAGACCTAGTGGAGATGTGTCGCGGCGTTCAGCATCCGATCCGCGGTCTGTTTTTGAGGAGTTATCTTTCTCAAGTCAGCAGAGACAAGTTGCCTGATATTGGTTCCGAATACGAAGATGGGGATTATGGCAGTGTAAAGGATGCAGTTGAATTTGTTCTAGAGAATTTCTCAGAAATGAACAAGCTCTGGGTTCGATTGCAACATCAGGGACCCGGTCGGGTAAAAGAGAAGAAGGATAAAGAAAGGAACGAGCTTCGCGATCTTGTAGGGAAAAACCTCCATGTTCTGAGTCAGATAGATGGTGTGGACCTTGAGATGTACAAAGACACCGTCCTTCCAAGTGTTCTAGAGCAGGTTGTCAACTGTAAAGATGAGCTTGCCCAATTTTATCTCATGGAGTGCATAATCCAGGTTTTTCCAGATGAATACCACTTGCAGACACTTGAGACACTCTTGGGCGCTTGCCCCCAATTACAGCCTACAGTAGACATCAAGACAGTGTTATCTCAGTTAATGGACAGGTTGTCAAATTATGCCGCCTCAAGTTCTGAAGTTTTACCCGAATTTTTGCAAGTGGAAGCATTTACCAAACTAAGTACTGCAATAAGCAGGGTGATAGAAGCACAGGTTGACATGCCTATTGTGGGTGCCATATCTCTGCATGTCTCTCTTCTTACATTTACTCTCCGTGTTCATCCGGATCGACTGGATTATGTGGATCAAGTACTGGGATCATGTGTCAAGAAGCTGTCTGGGAAACCAAAGCTTGATGACAATAGAGCAACAAAGCAAGTTGTTGCACTTTTAAGCGCCCCACTTGATAAATACAATGATGTTGTGACTGCTCTGACACTTTCCAATTATCCTCGTGTGATGGATCATCTTGATAATGTGACAAATAAACTCATGGCTCTGGTTATTATTCAAAGCATTATGAAGAATAACACCTACATATCTACTGCCGATAAGGTTGaagttttatttgaattaataaaagGGCTTATAATAGATTTGGATGGAACATCTGAGGATGAGATCGATGAAGAAGATTTCAGCGAGGAGCAAAATTCTGTTGCCCGCCTTATAAACATGCTTCATAATAATGACCCGGAGGAAATGTTCAAGATAATATGTACAGTAAAGAAACATATTATGAGTGGAGGACCAAGGCGCCTACCTTTCACTGTTCCTTCTCTTATACTTTCTGCACTTAAGTTGATCAGGCAATTGCAAGCCCAAGGTGGAGACATAGCAGGAGAAGAAGAACCTGCAACACCCAGAAAAATATTTCAGCTTTTAAATGAGACCATCGAAGTTCTATCTTCTCTATCATCTCCTGAACTGGCCCTGAGGCTGTATCTGCACTGTGCTGAGGTATGCTTGACCTTACAAACTTAA 1782 0.4203 MIPNDFHDEDKWLAEGIAAIQHNAFFMHRALDDNNLRDSLKYSAQMLSELRTSRLSPHKYYELYMRAFDELRRLEMFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYLRCKDTPVRDVLKDLVEMCRGVQHPIRGLFLRSYLSQVSRDKLPDIGSEYEDGDYGSVKDAVEFVLENFSEMNKLWVRLQHQGPGRVKEKKDKERNELRDLVGKNLHVLSQIDGVDLEMYKDTVLPSVLEQVVNCKDELAQFYLMECIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSQLMDRLSNYAASSSEVLPEFLQVEAFTKLSTAISRVIEAQVDMPIVGAISLHVSLLTFTLRVHPDRLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSAPLDKYNDVVTALTLSNYPRVMDHLDNVTNKLMALVIIQSIMKNNTYISTADKVEVLFELIKGLIIDLDGTSEDEIDEEDFSEEQNSVARLINMLHNNDPEEMFKIICTVKKHIMSGGPRRLPFTVPSLILSALKLIRQLQAQGGDIAGEEEPATPRKIFQLLNETIEVLSSLSSPELALRLYLHCAEVCLTLQT 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00183 593 PANTHER VACUOLAR SORTING PROTEIN 35 3 587 IPR005378 GO:0015031|GO:0030906|GO:0042147
Tsu01g00183 593 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 3 587 - -
Tsu01g00183 593 Pfam Vacuolar protein sorting-associated protein 35 12 588 IPR005378 GO:0015031|GO:0030906|GO:0042147
Tsu01g00183 593 Gene3D - 467 593 IPR042491 -
Tsu01g00183 593 SUPERFAMILY ARM repeat 208 522 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00183 Tsu-Chr1 1428884 1434953 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00183 K18468 - gmx:100775573 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00183 01 1428884 1434953 Tsu01g00183 01 1428884 1434953 ECH