Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05307 ATGCACCGACTCTCCAATCGTTCTTCCTCCGTCTCCGCCTTACTCCGTTACGGCGGCGCACTTAGCCGTGACGCAGTTGCTCCACTTTCACCTTCCATTTCTCATTCGGTGGGTGAGAATGACACAAAACCCAGATGGTATTCCATATTAGGTTCTGAGAAATCCAGCAATGTTAATCAGCTAAATTTGAAAAGAGATTTGTTTTTGGGAAAACGATATGAATCAACTGCTGCAGAATCTAATGCATCCAGTTCCCCACCAGCTGAGAAATTTGAGTACCAAGCAGAGGTTAGTCGGCTCATGGACCTCATTGTTAACAGTTTATACAGTAACAAGGAAGTGTTTCTCAGGGAACTTATTAGCAATGCAAGTGATGCCTTGGATAAGCTGCGGTTTTTGAGTGTTACAGAGCCTGAATTGATGAAGGATGCTATTGATTTTGATATCCGAATTCAAGCTGATAAAGATAATGGGATTATCACCATTACTGATACAGGCATTGGTATGACTAAGCAAGAAATAGTTGACTGTCTTGGAACTATTGCTCAAAGTGGAACTGCAAAGTTTTTGAAGGCTCTAAAGGATAATAAGGGTGCTGGTGGTGACAACAACTTAATTGGTCAATTTGGTGTGGGGTTTTATTCTTCTTTTCTAGTTGCTGATCGGGTGGTTGTCTCAACCAAGAGTCCAAAATCCGATAAACAATATGTTTGGGAAGGAGAGGTAAATGCTAGCTCATATACCATATCTGAGGAGACGGATCCTGAGAAGCTTATTCCAAGAGGAACTCGCCTTACACTGCATCTTAAGAGGGATGATAAAGGCTTTGCACATCCAGAGCGGATTGAGAAGCTTGTGAAAAACTACTCCCAGTTTGTCTCATTCCCTATATACACTTGGCAGGAAAAGGGATTCACCAAAGAAGTAGAGGTTGATGAGGATCCAGCTGAGTCAAAAAAGGATGACCAAGATGAGAAGACCGAGAAGAAGAAGAAAACTAAGACTGTTGTTGAGAAGTACTGGGATTGGGAGCTCACAAATGAGACTCAACCTATCTGGCTTCGTAATCCTAAAGAAGTCACCAAAGAGGACTACAATGAGTTTTACAAGAAAACATTTAATGAATACCTGGAGCCGTTGGCATCATCACACTTTACCACAGAGGGTGAGGTAGAATTTAGGTCTATACTTTATGTTCCTCCCTATGCTCCATCAGGGAAGGATGACATTGTCAATCCCAAGACCAAGAATATAAGACTATATGTGAAGAGAGTATTCATTTCAGATGACTTTGATGGAGAACTGTTCCCAAGATACTTAAGTTTTGTCAAAGGTGTGGTTGACTCAAATGATCTTCCACTCAATGTGTCACGTGAAATTCTTCAAGAGAGCCGCATAGTGCGGATTATGAGGAAACGGTTGGTCAGAAAGGCTTTTGACATGATTCTGGGGATATCCATGAGTGATAACAAAGAGGATTATGAGAAGTTTTGGGAGAACTTTGGCAAACACTTGAAATTGGGCTGCATTGAAGACCGTGAGAATCACAAACGTATTGCTCCCTTGCTTCGGTTTTACTCATCCCAAAGTGATGAATGGCTTATCAGCTTGGATGAATATGTTGAGAACATGAAGCCTGATCAAAAGGATATTTATTACATTGCTGCGGACAGTGTGAACAGTGCAAAGAACACACCTTTCTTGGAGAAACTCACAGAGAAGGATCTTGAAGTGCTGTTTTTGGTGGATCCAATAGATGAGGTTGCCATCCAAAATATTAAATCATACAAGGAAAAGAATTTTGTTGACATTAGCAAGGAAGACTTGGATCTAGGTGATAAGAATGAGGAAAAGGAAAAGGAGATGAAGCAGGAATTTAGCTCGACAATTGACTGGATTAAGAAACGTTTGGGTGATAAAGTTGCAAGTGTGCAAATTTCAAACCGACTGAGCTCTTCGCCTTGTGTCCTGGTGTCAGGAAAATTTGGTTGGTCTGCGAACATGGAAAGGTTAATGAAGACACAAACTATGGGTGATGCCACTAGCTTGGAATTCATGAGAAGCAGAAGGGTGTTTGAGATTAACCCTGACCACCATATTATCAGGAACTTGGATGCTGCATGCAAAACTAATCCCGACGATCAAGAGGCCCTCAGAGCTATTGATCTTTTGTACGATGCAGCTTTGGTTTCAAGTGGATTTACGCCTGATAATCCAGCACAGCTTGGAGGAAAGATATATGAGATGATGGGCATGGCTCTTAGTGGTAAATGGTCGTCTCCTAGTCAGTTTGAGTCCACTCAAACTCAGCCCCATGTCCTAGAAACTCTAGAAGCTGAAGTGGTCGAGCCTACTGAGGCTGGCACTCAAAAGTGA 2376 0.4196 MHRLSNRSSSVSALLRYGGALSRDAVAPLSPSISHSVGENDTKPRWYSILGSEKSSNVNQLNLKRDLFLGKRYESTAAESNASSSPPAEKFEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPELMKDAIDFDIRIQADKDNGIITITDTGIGMTKQEIVDCLGTIAQSGTAKFLKALKDNKGAGGDNNLIGQFGVGFYSSFLVADRVVVSTKSPKSDKQYVWEGEVNASSYTISEETDPEKLIPRGTRLTLHLKRDDKGFAHPERIEKLVKNYSQFVSFPIYTWQEKGFTKEVEVDEDPAESKKDDQDEKTEKKKKTKTVVEKYWDWELTNETQPIWLRNPKEVTKEDYNEFYKKTFNEYLEPLASSHFTTEGEVEFRSILYVPPYAPSGKDDIVNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSDNKEDYEKFWENFGKHLKLGCIEDRENHKRIAPLLRFYSSQSDEWLISLDEYVENMKPDQKDIYYIAADSVNSAKNTPFLEKLTEKDLEVLFLVDPIDEVAIQNIKSYKEKNFVDISKEDLDLGDKNEEKEKEMKQEFSSTIDWIKKRLGDKVASVQISNRLSSSPCVLVSGKFGWSANMERLMKTQTMGDATSLEFMRSRRVFEINPDHHIIRNLDAACKTNPDDQEALRAIDLLYDAALVSSGFTPDNPAQLGGKIYEMMGMALSGKWSSPSQFESTQTQPHVLETLEAEVVEPTEAGTQK 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05307 791 Gene3D - 520 606 - -
Trre9g05307 791 ProSitePatterns Heat shock hsp90 proteins family signature. 109 118 IPR019805 GO:0005524|GO:0006457|GO:0051082
Trre9g05307 791 MobiDBLite consensus disorder prediction 309 329 - -
Trre9g05307 791 Hamap Chaperone protein HtpG [htpG]. 76 751 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Trre9g05307 791 FunFam heat shock protein 90-5, chloroplastic 347 519 - -
Trre9g05307 791 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 111 271 IPR003594 -
Trre9g05307 791 SUPERFAMILY Ribosomal protein S5 domain 2-like 349 607 IPR020568 -
Trre9g05307 791 CDD HATPase_Hsp90-like 98 293 IPR020575 -
Trre9g05307 791 FunFam Heat shock protein 90 alpha 607 755 - -
Trre9g05307 791 Gene3D - 347 519 - -
Trre9g05307 791 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 89 303 IPR036890 -
Trre9g05307 791 FunFam heat shock protein 90-5, chloroplastic 76 318 - -
Trre9g05307 791 Gene3D - 75 317 IPR036890 -
Trre9g05307 791 FunFam Heat shock protein 90 520 606 - -
Trre9g05307 791 SUPERFAMILY HSP90 C-terminal domain 630 750 IPR037196 -
Trre9g05307 791 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 83 765 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Trre9g05307 791 Pfam Hsp90 protein 276 765 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Trre9g05307 791 Gene3D - 607 754 IPR037196 -
Trre9g05307 791 PIRSF HSP90_HTPG 62 789 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Trre9g05307 791 PRINTS 90kDa heat shock protein signature 159 176 IPR020575 -
Trre9g05307 791 PRINTS 90kDa heat shock protein signature 110 132 IPR020575 -
Trre9g05307 791 PRINTS 90kDa heat shock protein signature 177 194 IPR020575 -
Trre9g05307 791 PRINTS 90kDa heat shock protein signature 261 278 IPR020575 -
Trre9g05307 791 PRINTS 90kDa heat shock protein signature 89 109 IPR020575 -
Trre9g05307 791 PRINTS 90kDa heat shock protein signature 279 297 IPR020575 -
Trre9g05307 791 PRINTS 90kDa heat shock protein signature 206 228 IPR020575 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05307 Trre-Chr9 57964197 57970107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05307 K09487 - gmx:100806710 1348.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05307 9 57964197 57970107 Trre9g05307 9 57964197 57970107 ECH