Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05268 ATGTTTGGTAGAGGAGCAATTGGATCAATCTTGAAGCGCAGTAAAGAAGCATGTTTCATTCACAAACTCACAGCAAGGAAAACGACGTCGTCGATTCCTTTCTCTCATCCTTCCATTCAACAACACTCCTTCTTCAACCCTTCTGTTTCCACCCATTTCTTTCATACTTTCCGATCCCATTTTATTCCTAAGGGTCATCATGTGCCGTTCATTAGGAACTTTTCTAAGACGGTGTCTGCTGGGGCGGTACATAAGGAGGAGTTGAAGCTGCTTGTGACAGGAGGTTCTCATGCCCAGAAGGTGGTTGGAATATGGCTATTTGGCTCTGCCGCATGGGTATTTAGCATGGTTATACTTGGGGGTTTAACCAGACTCACTAGATCCGGTCTTTCAATGACTGATTGGAAATTCACGGGTGAGTTCCCACCTTTGACAGATGAGGCGTGGTTGCAAGAGTTTGAAAAATATCAGCAGTCACCTGAATACAAACGTGTTAACAAAGGGATGAAGATTGAAGAATTCAAGTTCATATATTGGATGGAATATGGACATCGTATGTGGGGGAGAGCACTGGGAATTATGTTTGCTTTACCGTATTCATATTTTCTCCATAAAGGGTATATTACATTAAGATTAGGACTGAGAGTCTCTGCTTTATTTGGCCTCGGTGCTGGGCAGGGTCTCATCGGCTGGTGGATGGTTAAAAGTGGTTTAGAGGAACCGGCAACTGAATATTCTCAGCCAAGAGTAAGCCCCTATCGTCTTGCAGCTCACCTTACATCAGCATTTGCTATTTACTGTGGCCTCTTTTGGACAGCACTTTCTGTTGTTATGCCTGAGCCACCTGCCGAATCACTGACATGGGTCCGTGGGGCAGCTAAAGTGAAGAGACTTGCGTTGCCTGTCAGCCTACTCGTCGGTCTTACTGCTGTCTCTGGTGCATTTGTTGCAGGAAATGATGCTGGGCATGCATTTAATACTTTTCCGAAGATGGGTGATACATGGATCCCAGAAGACATTCTTGAAATGAAACCTCTGATTCGAAATTTCTTTGAGAATACATCGACTGTACAGCTCAATCACCGGATCCTTGCAACTGCAACCCTAATTTCAGTAAGTGCCTTATGGTTGTCAACAAGAAAACTGGACATACATCCTGCAGTACGTTCTGTGATCGGAGGCGTCTTTGGAATGGCATCTCTTCAGGTCACCTTGGGAATTTCGACCCTTCTTTCATATGTACCTGTTTCTTTGGGTACTGCGCATCAGGCTGGAGCCTTAACTCTTCTGACGTTTATGTTACTACTTAATCACACTGTCCGAAGGCCGTCATCGTCCCTTCTCAAATCTCTGCCTCAAGTTGTCAAGGCAAACAAATATACAAGAGTTTAG 1392 0.4461 MFGRGAIGSILKRSKEACFIHKLTARKTTSSIPFSHPSIQQHSFFNPSVSTHFFHTFRSHFIPKGHHVPFIRNFSKTVSAGAVHKEELKLLVTGGSHAQKVVGIWLFGSAAWVFSMVILGGLTRLTRSGLSMTDWKFTGEFPPLTDEAWLQEFEKYQQSPEYKRVNKGMKIEEFKFIYWMEYGHRMWGRALGIMFALPYSYFLHKGYITLRLGLRVSALFGLGAGQGLIGWWMVKSGLEEPATEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESLTWVRGAAKVKRLALPVSLLVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPEDILEMKPLIRNFFENTSTVQLNHRILATATLISVSALWLSTRKLDIHPAVRSVIGGVFGMASLQVTLGISTLLSYVPVSLGTAHQAGALTLLTFMLLLNHTVRRPSSSLLKSLPQVVKANKYTRV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05268 463 Hamap Heme A synthase [ctaA]. 99 443 IPR023754 GO:0006784|GO:0016020|GO:0016653
Trre9g05268 463 Pfam Cytochrome oxidase assembly protein 104 433 IPR003780 GO:0006784|GO:0016020|GO:0016653
Trre9g05268 463 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 67 456 IPR023754 GO:0006784|GO:0016020|GO:0016653
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05268 Trre-Chr9 57631388 57634261 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05268 K02259 - gmx:100784443 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05268 9 57631388 57634261 Trre9g05268 9 57631388 57634261 ECH