Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05263 ATGACTGTTGGAGCAGGAATTACTGTTGCTGATGGAAACTTGGTGGTTTTGGGGAAAAAAGTTCTGAGTAATGTTCATGATAATGTTCTTGTTACTCCTCCATCTGATGGTTCATTGCTCAATGGTGCATTCATTGGTGTTCAATCTGATCAAAAGGGTAGCCGCAGAGTTTTTCCTATTGGCAAGCTTGAGGGTTTAAGGTTTATGAGTCTTTTCCGGTTCAAGATGTGGTGGATGACACAGAGAATGGGTACTTGTGGACAAGAAATTCCCATTGAGACACAATTTTTGCTGATTGAAGCACACAATGATTGTGATATTGATGGAGGAGAAGAAGACCAAGACGGTTCTACCTACGCGGTTTTGTTGCCTCTTTTGGAAGGAGATTTTAGGGCAGTTCTTCAAGGGAACGATCAAAATGAAATTGAGATTTGTGTCGAAAGTGGATGTCCTGATGTGGAGGAATTTGATGGGACTCATTTGGTGTTTATTGGGGCTGGATCAGATCCTTATGAAGTTATAACAAATGCTGTCAAGACTGTTGAGAAACACTTGAAGACATTCTGTCATCGCGAGCGAAAGAAGATGCCAGATATGCTTAACTGGTTTGGTTGGTGTACATGGGATGCTTTCTATACCAATGTTACATCAGAGAATGTGAAGCAAGGACTACAAAGTTTCGAGGAAGGTGGAATTCCTGCGAAGTTTGTTATAATTGACGACAGATGGCAATCTGTTAGCATGGACCCCAATGGTATCGAGTGGAAAGCCGATTGTGCAGCAAACTTTGCGAATCGCTTAACTCATATAAAAGAAAATCACAAGTTCCAGAAAGACGGCAAGGAAGGTCACCGGATAGAGGACCCTGCCATGGGACTTCATCATATAACCAATGAAATAAAAAAAGAACATGCCATAAAGCACGTGTACGTGTGGCATGCGATAACAGGATATTGGGGAGGTGTTAAACCCGATACTAGTGGCATGGAACACTATGAGTCAAAGATGACATTCCCTATCTCTTCTCCTGGAGTCAAGTCCAATCAACCAGATGAAGCTTTAGATACCATTGCCATTAATGGACTTGGCCTTGTGAATCCCGAGAAAGTTCATCACTTTTACGATGAACTTCACTCGTATCTAGCATCTGCTGGTATTGACGGTGTCAAAGTTGATGTTCAGAACATCCTTGAAACTCTTGGAGCAGGACATGGTGGGAGAGTGAAACTTGCACGGAAATATCATCAGGCCTTGGAGGCATCGATCTCTAGGAACTTTCCTGATAATGGAATCATTTGTTGCATGAGTCACAACACAGATGGATTGTATAGTGCGAAGCGTTCGGCTGTTATTAGAGCATCAGATGATTTCTGGCCTAGAGACCCTGCATCACACACGATTCACATTGCGTCAGTTGCATACAATACTATTTTCCTTGGTGAATTTATGCAGCCAGATTGGGACATGTTTCATAGTCTACATCCAATGGCTGAATATCACGCTGCTGCAAGAGCCGTTGGAGGATGTCCTATTTATGTCAGTGACAAGCCTGGACACCATGACTTTAATCTTTTGAAGAAGCTTGTACTTCCTGATGGTTCTATATTAAGAGCTAAACTTCCAGGAAGACCAACCAAAGATTGCTTATTTGCCGATCCTGCTAGAGATGGAAAGAGTCTTCTAAAGATATGGAACATGAATGACTATTCTGGAGTTGTTGGTGTGTTCAATTGCCAAGGAGCTGGGTGGTGCAAAGTTGGAAAGAAGAATCTTATCCATGACGAGAATCCAGGCACAGTCACCGGCATCATTAGGGCTAAAGATATCGACTATTTATCCACAGTTGCAGGTGATAAATGGACAGGAGACGCTGTTATATTTTCCCATCTTTCTGGTGAAGTAGTGTACCTTCCAAAGGATGTTTCTATCCCGATTACCATGAAATCGCGAGAATATGAAGTTTTTACGGTAGTCCCTACGAAGGAATTACCAAATGGTGTCAAATTTGCTCCTATTGGTTTAATCAAGATGTTCAATTCAGGAGGATCTATCAAAGAGTTCAGTTATGGATCTAATGGAAGTGCAAATGTTTCCATGAAAGTGCGCGGGTGTGGCTTATTCGATGCTTATTCATCAACTCGGCCGAAGTTGATCACCGTTGATTCAGAAGAAGTGGATTTCAGTTATGAGGAAGAATCTGGATTGGTGACTATTGATTTGAGAGTACCAGAGGAAGAGTTATACCAATGGAATGTTTCTATTGATTTATAA 2271 0.4179 MTVGAGITVADGNLVVLGKKVLSNVHDNVLVTPPSDGSLLNGAFIGVQSDQKGSRRVFPIGKLEGLRFMSLFRFKMWWMTQRMGTCGQEIPIETQFLLIEAHNDCDIDGGEEDQDGSTYAVLLPLLEGDFRAVLQGNDQNEIEICVESGCPDVEEFDGTHLVFIGAGSDPYEVITNAVKTVEKHLKTFCHRERKKMPDMLNWFGWCTWDAFYTNVTSENVKQGLQSFEEGGIPAKFVIIDDRWQSVSMDPNGIEWKADCAANFANRLTHIKENHKFQKDGKEGHRIEDPAMGLHHITNEIKKEHAIKHVYVWHAITGYWGGVKPDTSGMEHYESKMTFPISSPGVKSNQPDEALDTIAINGLGLVNPEKVHHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCPIYVSDKPGHHDFNLLKKLVLPDGSILRAKLPGRPTKDCLFADPARDGKSLLKIWNMNDYSGVVGVFNCQGAGWCKVGKKNLIHDENPGTVTGIIRAKDIDYLSTVAGDKWTGDAVIFSHLSGEVVYLPKDVSIPITMKSREYEVFTVVPTKELPNGVKFAPIGLIKMFNSGGSIKEFSYGSNGSANVSMKVRGCGLFDAYSSTRPKLITVDSEEVDFSYEEESGLVTIDLRVPEEELYQWNVSIDL 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05263 756 Gene3D Aldolase class I 199 527 IPR013785 -
Trre9g05263 756 SUPERFAMILY (Trans)glycosidases 197 528 IPR017853 -
Trre9g05263 756 FunFam Probable galactinol--sucrose galactosyltransferase 1 200 527 - -
Trre9g05263 756 PANTHER - 1 753 IPR008811 -
Trre9g05263 756 Pfam Raffinose synthase or seed imbibition protein Sip1 8 739 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05263 Trre-Chr9 57606510 57611066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05263 1 754 Glycoside Hydrolase AT1G55740 71.164 0.0 1110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05263 K06617 - gmx:100785506 1391.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05263 9 57606510 57611066 Trre9g05263 9 57606510 57611066 ECH