Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05231 ATGAGCGGCGGTGGTGGCGGGTCTAGGGTTCCGATCCCCAACAATGTACGGAAAACCCTCCACGACATCAGGGAGATCACCGGAAAACAGCACACAGACGATGAAATCTACGCCGTCCTTAAAGAATGTTCAATGGATCCCAATGAAACTGCTCAAAAGCTTCTCTATTTAGATACTTTTCATGAGGTTAGAAGGAGACGCGACAGGAAGAAGGAGGGACTGAGCGGCAGGGTTTCTGAGGAGTCTAGATTAAACCAACGTGGACAGGGGAGGGGGGCAAGGGGTCCTTCAGGGGGCTATTCCTCAAACTTTCTTGATGGTGGTGGTGGGAGGAGCCTTGCTATTCGAAGAGAAAATGGACTCCATCACACTGCAGAAAGAACTCGTGCTTCCTCTACTCAGCCAGATTTACAGAAAAATACTAATACAGCACCTCAAGCCTTAAGTGATTCAGCTGTTGCACCCCATAGTGCTGCAAATCAATCCAATGGGAAGTCTGGTCATGGTTCTTCTGGCCAATCTCTCGTAGGTAGTGTAGCAAGTGTCCCTAAAAGCAGTTCAGCTGCTAATGACACTGTCAATAAAGAAAATGTCCTACCTCAAGCAGTTGGTGTTGCAGCAACCACTTCCCCTACTCAAACCTTTGCCTCAATTACAAGAACTGATCAAGGAAAATCTCTGTCAAGTTCTGATCAACATCAAATTTCTGTATCTGGTGTTTATTCCTCTTCAGATCCTGTGCTGGCACCATCCATAACCCGGAATCCTGGTGTTGGCGGTGCTATCAGTAGGGAAGTCGGGAGTGACCGGATATCTGCTGGACCGAATCATGTTAAAGGAGACAAACTTGAAGAAGCTGGTGATTTATCAGCATCCGAGAATGAAAAGTCCGAGTCAATGAATTCAGTAAGCAACCTGAATGACATACAGAAGACAAATGAAGTTGAAGGTAACCAGTTATCTGAGCCCTTGCAACTCTCTTCCTCTTCATCATTGAATAGTTCTTTGAGGCCATCTTCCAGTTGCGTTATCCAACCACCTGAAGCCGATGTCACCGAGGTCTCAACGTCAGAAGTTCATGTGCAATCAACTGAATTGAGACAACATGTTACTTTTCCAAACCATTTCCAAGTGCCTGAGTCTTTGAAAGGTGGTCTGACATTTGGAAGCTTTGATACTTTTGGTCCAAGTGGAACATCTAGTAGTGTAACTGGTTGTGATAATAGCACTTCTCCCACTCTTGAATCTTCTCCAGGGAATGATGAAGCTGTTACTTCCAGCAACCAAAGTGCGCCATTGACTGAACACGGAGGTCATCTTGATTATGCACATCCTTCATCTTTTCTAATTAATATGACACCGGCTTCAGAAAGCATTTCTATAACTGGCAGTGATTCAAAGATTGAGCATCCAAAGCCGGATGTACTGTTAACTCCCGAGGGCCATCCGCTTCTGTCTGTTCAAAGTGCTCAAAATTATGGTTTGAATTTCATGTCTACAATGTTAGGGACTCAGCAAGTTCAATTTGAGGGTAGTGAGCTTCAGGCACAAGAAACAGCACACTTTCCTTCCTTTGCTACTGCAAGTTCTCAGGCTGTGTCCCCCAGCCCAACTCCACCTCTACAGAGCACTATACCTGTATCTCCACAGACAGTTTCTTATTTTAGGCCACCATACCCAGCTAACTTCTTCCCATATGGCCCCTATTATCCCCCAATTTACGTGTCTCCGATGCATCAATTTTTAAGCCACAATGGTTTCCCTCAACAGCCATCAGCTGGCAACATGTATCTACCAGCCGCGGCTGCAGCTGCTGGGATAAAATTCCCTCTTCCGCAATTCAAGGCTGGAGCAAACACAGGAAATATGGCTCATATTGGAATTCCTCCTGGATCATATATCACTCCACCTGTTGGATATGCTCCTAGTCCGACAGTTAATAGTGGAAGCTCTGCCGGAACTGAAGATATTGCAGTGTCTCAGCTGAAGGAAAACCAAATTTATACAACTGGACAACTGAGTGAAGGCTCTGCTGTTTGGATACATGCACCAGGCCAAGATATATCCAGTTTGCAACTCAATTCTCTATATAACCTTACCCCTCAGGGCCAACATCTCAACTTCCCCCAGACCCAGGCTGCTCACGGAGTATTTCCTGGTATCTATCAACCAGGGCAGACAGTAGCTTCACCTTCTACCCTTTTGCAGCAGTCTCAAGCGGTCGCTGGCCCTGTTGAAACTGTAGGCCCCCCTCCAGGATCTTATCAGCAGCCTGCACCTGCACAAATCAATTGGAATTCTAATTTTTAG 2310 0.4597 MSGGGGGSRVPIPNNVRKTLHDIREITGKQHTDDEIYAVLKECSMDPNETAQKLLYLDTFHEVRRRRDRKKEGLSGRVSEESRLNQRGQGRGARGPSGGYSSNFLDGGGGRSLAIRRENGLHHTAERTRASSTQPDLQKNTNTAPQALSDSAVAPHSAANQSNGKSGHGSSGQSLVGSVASVPKSSSAANDTVNKENVLPQAVGVAATTSPTQTFASITRTDQGKSLSSSDQHQISVSGVYSSSDPVLAPSITRNPGVGGAISREVGSDRISAGPNHVKGDKLEEAGDLSASENEKSESMNSVSNLNDIQKTNEVEGNQLSEPLQLSSSSSLNSSLRPSSSCVIQPPEADVTEVSTSEVHVQSTELRQHVTFPNHFQVPESLKGGLTFGSFDTFGPSGTSSSVTGCDNSTSPTLESSPGNDEAVTSSNQSAPLTEHGGHLDYAHPSSFLINMTPASESISITGSDSKIEHPKPDVLLTPEGHPLLSVQSAQNYGLNFMSTMLGTQQVQFEGSELQAQETAHFPSFATASSQAVSPSPTPPLQSTIPVSPQTVSYFRPPYPANFFPYGPYYPPIYVSPMHQFLSHNGFPQQPSAGNMYLPAAAAAAGIKFPLPQFKAGANTGNMAHIGIPPGSYITPPVGYAPSPTVNSGSSAGTEDIAVSQLKENQIYTTGQLSEGSAVWIHAPGQDISSLQLNSLYNLTPQGQHLNFPQTQAAHGVFPGIYQPGQTVASPSTLLQQSQAVAGPVETVGPPPGSYQQPAPAQINWNSNF 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05231 769 MobiDBLite consensus disorder prediction 124 143 - -
Trre9g05231 769 Pfam GBF-interacting protein 1 N-terminal 12 72 IPR009719 -
Trre9g05231 769 MobiDBLite consensus disorder prediction 323 343 - -
Trre9g05231 769 MobiDBLite consensus disorder prediction 397 434 - -
Trre9g05231 769 SUPERFAMILY UBA-like 12 73 IPR009060 GO:0005515
Trre9g05231 769 PANTHER FLOCCULATION PROTEIN (DUF1296) 1 526 IPR044277 -
Trre9g05231 769 MobiDBLite consensus disorder prediction 275 292 - -
Trre9g05231 769 MobiDBLite consensus disorder prediction 66 113 - -
Trre9g05231 769 MobiDBLite consensus disorder prediction 241 305 - -
Trre9g05231 769 MobiDBLite consensus disorder prediction 397 442 - -
Trre9g05231 769 MobiDBLite consensus disorder prediction 126 143 - -
Trre9g05231 769 MobiDBLite consensus disorder prediction 151 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05231 Trre-Chr9 57320384 57325844 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05231 - - psat:127117563 1160.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05231 9 57320384 57325844 Trre9g05231 9 57320384 57325844 ECH