Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05229 ATGGGAAGCAACGATTTGAAGTACGAGGTTACACAAAACGCTTACATCAAACTCGTTCTTCACTCTCTCAAACACCCTACATCCGCCGTCAACGGCGTTTTGATCGGCCGCATCTCATCTTCCAATGACACCGTCGAGATCACCGATGCAGTCCCTCTCTTTCATTCTCAAATCCCTCTTCTTCCTCAATTGGAGATCTCTCTCATTCTGATAGAGGAATATTTTTCTGCTAAAGGGTTGAACATAGTTGGTTATTTTCATGCCAATGAGAGGTCTGATGAATTTGAGCTTGGTGGTGTTGCGAAGAATATTGGTGATCATATCACTCGCTACTTTCCTCAAGCTGCTATTTTATTGTTGGATAACAAGAAGCTCGAAGCTTTGAAAAAGAGCAAGGGTAGCGGTGCTGTAGTGCAGCTTTATGTTAGGGATGCATCTAAGAACTGGAAGTTGGTTCAGTCGGATGCAAACAACCGATTCTCTCTCAAAGAGCCATCAGCAAATCTCATCTTATTGGATTATATTTCATCTGAGAAATACAAAGACATTGTAGATTTTGATGATCACCTTGATGACATAAGCAAGGATTGGCTAAACCCAGGGCTCTTCAACTGA 615 0.4211 MGSNDLKYEVTQNAYIKLVLHSLKHPTSAVNGVLIGRISSSNDTVEITDAVPLFHSQIPLLPQLEISLILIEEYFSAKGLNIVGYFHANERSDEFELGGVAKNIGDHITRYFPQAAILLLDNKKLEALKKSKGSGAVVQLYVRDASKNWKLVQSDANNRFSLKEPSANLILLDYISSEKYKDIVDFDDHLDDISKDWLNPGLFN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05229 204 CDD MPN_UPF0172 10 199 IPR005366 GO:0072546
Trre9g05229 204 ProSiteProfiles MPN domain profile. 8 141 IPR037518 -
Trre9g05229 204 Pfam Uncharacterised protein family (UPF0172) 7 201 IPR005366 GO:0072546
Trre9g05229 204 PANTHER ER MEMBRANE PROTEIN COMPLEX 6 204 IPR005366 GO:0072546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05229 Trre-Chr9 57314848 57316758 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05229 K23569 - gmx:100527135 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05229 9 57314848 57316758 Trre9g05229 9 57314848 57316758 ECH