Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05228 ATGGCAGGAGTTGTTGAAGATACATCCCCTGTTCATACTAAGGACCATAATGAATCCAAACTTACCATTGATGATGATAAGGACAAAGAAGTGGATGATTCTCCTATAGAGCAGGTCAGACTAACAGTGCCAATAACTGACGATCCTACACAACCAGCACTGACATTTAGGACATGGACTATTGGTTTGGGATGTTGCATTATCCTTTCCTTTGTGAACCAATTCTTTGGGTACAGAACCAACCCTTTATCTGTCTCTTCTATTGCAGCACAAATAGTTTCTCTCCCACTTGGGAAACTAATGGCTGCAACACTTCCAACAACAATGTATAAAGTCCCCTTCACTGCTTGGTCTTTCACATTGAATCCTGGACCGTTCAATTTGAAGGAACATGCCCTTATAACCATTTTTGCTAATGTTGGATCTAGTGGTGTTTATGCCATTAGCATTGTCACTATTGTTAAGGCTTTCTATCGCAGGAGTATCAATCCAATTGCTGCTTTTTTGCTAGCATTGTCAACTCAGATGCTTGGTTATGGATGGGCTGGTATATTCAGAAAGTTCCTTGTGGAGTCTCCCTACATGTGGTGGCCTTCAAATCTTGTCCAAGTGTCTCTATTTAGGGCATTTCATGAAAAAGAAAAGAGGCCTAAAGGAGGAAACACTAGGTTGCAATTCTTTTTGCTGATATTTGTGGCTAGCTTTGCTTATTACATTGTTCCAGGCTGCTTTTTCCAATCAATATCAACCATCTCTGTAGCATGTTTGATATGGAAAAGCTCTGTCACTGCACAACAGATTGGTTCAGGAATGCATGGTCTTGGTCTTGGTTCATTTTCCCTTGATTGGAACACTGTTGCTGGTTTCTTAGGAAGTCCTTTGGCTTTTCCTGGTTTCGCCATCATTAACCTTTTGGTTGGATTTGTGTTGTATATCTATATTGTGATTCCAATTTCCTATTGGAGCAATTTGTATGAAGCCAAAAAGTTTCCTCTCATCCATTCTCACACATTTGATTCCACTGGTGCAATATATAATGTTTCTAGGATTCTTAACGATGCAACCTTTGACATTGATATGGATGCTTATAACAATTACAGTAAGCTCTATCTTAGTATCACATTTGCATTTGCTTATGGATTGAGCTTTGCAATGCTCTCCGCCACCATCTCACATGTTTTTCTCTTCCATGGAAAAACAATTTTTCAGTTTTGGAGGAAGACAACAAACACACTAAAAGAACAAGTCGGAGACGTGCATACAAGAATCATGAATAAAAACTATGAACGAGTCCCTGAGTGGTGGTTCATGAGCATTTTAGTTCTTATGACTATTTTGGCCATCATATGTTGTGAAGGCTTTGGCAAGCAGCTCCAACTTCCATGGTGGGGAGTATTGCTTTCTCTAACAATTGCATTGGTTTTTACTTTGCCAGTTGGTGTCATTCAAGCAACAACAAATCAGAAAGCTGCTGGACTTAATGTGATCACTGAGTTGATCATTGGTTACCTTTATCCTGGAAAGCCCCTTGCTAATGTAGCCTTCAAGACTTATGGATACATCAGCTTGTCACAAGCACTTAGTTTCCTCCAAGACTTCAAACTAGGCCACTACATGAAGATTCCTCCAAAATCTATGTTCCTAGTACAGTTGGTTGGAACTTTGGTTGCTTCAAGTGTTCAATTTATTACAGCATGGTGGCTTCTAACAACTATTCCACACATATGTGATCCATCATTGTTGCCAAAGGGTAGTCCATGGACATGTCCTGGTGATACTGTGTTTTACAATGCTTCAATCATATGGGGAATAGTAGGACCACAAAGGATGTTCACCAAGGATGGAATTTACCCAGGATTGAATTGGTTTTTCCTCTTCGGTCTACTTGCGCCTGTTCCAGTGTGGCTGCTTGCTCGGAAATATCCGAATCACAAATGGATTGAACTCATCAACATGCCACTTATCATTGCAGGCCCCCATGGAATACCACCGGTTAGATCAATAAATTATATTTCATGGGGAGTTGTTGGAATCTTTTTCAATATCTATGTTTACAAACACTTCAAGTCATGGTGGGCAAGACACACTTACATTCTATCAGCTGCTTTGGATGCTGGTATTGCTTTCATGGGTGTGTTGCTATATTTTTCACTTCAATCTTATGGTATCAATGGTCCAGCATGGTGGGGTACTGATGAAGATGATCACTGTCCCTTGGCTACATGCCCTACAGCTCCCGGTGTTGTTACCAAGGGATGTCCTACCTTCTTTTGA 2274 0.4046 MAGVVEDTSPVHTKDHNESKLTIDDDKDKEVDDSPIEQVRLTVPITDDPTQPALTFRTWTIGLGCCIILSFVNQFFGYRTNPLSVSSIAAQIVSLPLGKLMAATLPTTMYKVPFTAWSFTLNPGPFNLKEHALITIFANVGSSGVYAISIVTIVKAFYRRSINPIAAFLLALSTQMLGYGWAGIFRKFLVESPYMWWPSNLVQVSLFRAFHEKEKRPKGGNTRLQFFLLIFVASFAYYIVPGCFFQSISTISVACLIWKSSVTAQQIGSGMHGLGLGSFSLDWNTVAGFLGSPLAFPGFAIINLLVGFVLYIYIVIPISYWSNLYEAKKFPLIHSHTFDSTGAIYNVSRILNDATFDIDMDAYNNYSKLYLSITFAFAYGLSFAMLSATISHVFLFHGKTIFQFWRKTTNTLKEQVGDVHTRIMNKNYERVPEWWFMSILVLMTILAIICCEGFGKQLQLPWWGVLLSLTIALVFTLPVGVIQATTNQKAAGLNVITELIIGYLYPGKPLANVAFKTYGYISLSQALSFLQDFKLGHYMKIPPKSMFLVQLVGTLVASSVQFITAWWLLTTIPHICDPSLLPKGSPWTCPGDTVFYNASIIWGIVGPQRMFTKDGIYPGLNWFFLFGLLAPVPVWLLARKYPNHKWIELINMPLIIAGPHGIPPVRSINYISWGVVGIFFNIYVYKHFKSWWARHTYILSAALDAGIAFMGVLLYFSLQSYGINGPAWWGTDEDDHCPLATCPTAPGVVTKGCPTFF 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05228 757 PANTHER ISP4 LIKE PROTEIN 26 754 IPR004648 GO:0055085
Trre9g05228 757 NCBIfam OPT family oligopeptide transporter 38 718 IPR004813 GO:0035673
Trre9g05228 757 Pfam OPT oligopeptide transporter protein 54 717 IPR004813 GO:0035673
Trre9g05228 757 NCBIfam small oligopeptide transporter, OPT family 32 720 IPR004648 GO:0055085
Trre9g05228 757 MobiDBLite consensus disorder prediction 1 32 - -
Trre9g05228 757 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05228 Trre-Chr9 57309186 57312853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05228 1 756 Organic Solute Cotransporters AT4G26590 65.212 0.0 1040
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05228 - - gmx:100776230 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05228 9 57309186 57312853 Trre9g05228 9 57309186 57312853 ECH