Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05218 ATGATGGGTAGTAACAATAACAGCAGAGAAAGAGAAGAAACACTCACATTCACAATCCCTTCATCATCTTCTCATCATTCTTCACCAATTACTGTTTCTGACACACTTGATAGTTATCTCACTGACCCAAGAAGCGCTTCTGGAAGTTTCCAGAACGATGGTGTTCTTTCTGGTGGTGGTGGTGATGCTACTGATGTTGAGTTTGGTTTCTCAAGACCTGATTTTCGACAGAGTTCTCTTGTTGGTACTGTTGAGTTGTACGAACGACATGTTTTTCTTTGTTACAAGAATCCGAGGTTTTGGCCATCTAGGATTGAAGCTGCTGAGTTTGATCGGTTGCCTAGGTTGCTTTATGCTGCTGTTAAGGCTAGGAAGAATCAAATGAAGAAGGAGACCCGGTTAACGATATGTGAGGGTCACGATGGAACTGAAACATCGAATGGGGATGTGTTAATTTTCCCTGACATGATCAGATACAGGAGATTGACTCATTTTGATGTTGAAACTTTTGTTGAAGAAGTTCTTGTGAAGAATGGAGAATGGTTACCTGGAACACCTGAAACCTTGAAAGGTTCATATGTTTTTGTGTGTTCACATGGCTCACGTGATCGCAGATGTGGGGTTTGTGGACCGGTTTTGGTTAGTAGATTCAGGGAAGAGATAGAGTTGCATGGTCTACAAGGTAAAGTATTTGTTAGCCCGTGCTCGCACATTGGGGGACATAAGTATGCAGGAAACGTCATTATATTTGGATCAAGCGTGAATGGAGAAGTCAGTGGCCACTGGTATGGATATGTTGCCCCGGATGATGTACCTTTATTGCTTCAACAACATATCATGAAAGGGGAGATTATAGACTCGTTATGGAGGGGTCAGATGGGTTTATCAGAAGAGGAGCAAATAATAAAACAAGAACAAAGGCTTCTGCTGAATGGCATAGGAATATTAGAAGAAAGCACTGCACTGAATGGATCCCTAGACAATTTCACAAGCTGCTGCCAATCAAACGGAGTGAGCTGCTGCCAAGAAAACGGAGACTCTTCCTTTTGTCAGAGCCAGGTTTCAGTGGATAACATAATGAGCTCCGATGCCATTGAGACTGAGGCAAAGCTCTTAGCCGATAACAAGAGCAGCAGCAAGCCCGTGATTTCTCGGACCAGCAGCGGGAAAGGAGCTTCACGGAAGTTTCATTCCATGACAACATGGCTTGACGGCTGGGAGCAGGAAGATACTTATGCCGCTCTTGCTGTTGCCTGTGCTGCAGTATCGGTTACTATTGCCTATAACTGCTACAAACAATTGACATAG 1308 0.4373 MMGSNNNSREREETLTFTIPSSSSHHSSPITVSDTLDSYLTDPRSASGSFQNDGVLSGGGGDATDVEFGFSRPDFRQSSLVGTVELYERHVFLCYKNPRFWPSRIEAAEFDRLPRLLYAAVKARKNQMKKETRLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVLVKNGEWLPGTPETLKGSYVFVCSHGSRDRRCGVCGPVLVSRFREEIELHGLQGKVFVSPCSHIGGHKYAGNVIIFGSSVNGEVSGHWYGYVAPDDVPLLLQQHIMKGEIIDSLWRGQMGLSEEEQIIKQEQRLLLNGIGILEESTALNGSLDNFTSCCQSNGVSCCQENGDSSFCQSQVSVDNIMSSDAIETEAKLLADNKSSSKPVISRTSSGKGASRKFHSMTTWLDGWEQEDTYAALAVACAAVSVTIAYNCYKQLT 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05218 435 Gene3D Glutaredoxin 87 182 - -
Trre9g05218 435 Gene3D Glutaredoxin 191 292 - -
Trre9g05218 435 MobiDBLite consensus disorder prediction 1 36 - -
Trre9g05218 435 Pfam Sucrase/ferredoxin-like 80 291 IPR009737 -
Trre9g05218 435 FunFam APD1p protein 191 290 - -
Trre9g05218 435 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 44 422 IPR009737 -
Trre9g05218 435 CDD TRX_Fd_Sucrase 191 293 IPR009737 -
Trre9g05218 435 SUPERFAMILY Thioredoxin-like 193 295 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05218 Trre-Chr9 57243186 57246619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05218 - - gmx:100816329 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05218 9 57243186 57246619 Trre9g05218 9 57243186 57246619 ECH