Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05193 ATGTCTCTCAGATTTCTCCGATCTCGTTTCTTTTCCGTCGCATCGAAACGATTCCTCTGCACCAATGCAGCTCCTGCTACTCCTCAACCTTCTCCTCCTTCCGTCACTTCCCCTAACCGTTGGAATTTCCTCAAATACGCCGTCATCGGTGCCTTCACCGGAACCACTGTCCTCACTGGTTACGCCTCTTACGCTTATAATTTGGACGAAATTGATGAGAAAACGAAGTCGTTTCGTGAATCGGTTAAATATACTCCGACTGATGGAGCTACTGCTCTCGATAAGTTTCAAGGGATGTTATACTCAACTGCAGTGACAGTGCCTGCTAAAGCAGTAGAGCTTTATTTGGATGCAAGAAGGTTAATTGAAGAACAAGTTAGGAGTTATACGGAACCATACACAGACAAACTCCTTCCAGATTTGCTTCCTCAGGAGCAACATGTGTTCACACTTGTTGTAGATCTCAATGAAACATTGATTCACTATAATTGGAAGAGAGATACAGGCTGGCAGACTTTTAAAAGACCTGGAGTTGATGCTTTCTTGGAACATCTAGCCCAGTTCTATGAAATAGTGGTGTATACAGATGAACAAAATATGTTTGTAGACCCTGTTATAGAAAGGCTTGATCCCAAGCACTGCATTAGGTACAGGCTATCAAGGCCTGCTACTAAGTATCAGGATGGGAAACACTATAGAGATCTTTCAAAACTAAACAGGAATCCTGCAAAAGTTATGTACTTAAGTGGCCATGCTCTAGAAAGTTGCTTACAACCTGAAAACGCTGTTCCTATTAAGCCATGGCTGCATACTGATAAAGATGATACAGCTCTTGTGGATTTTATACCATTCCTTGAGTTTGTTGCCCGTAGTAGTCCGGCTGATATAAGACCAGTGCTACAGTCTTACCAAGGACTTGATATTCCAAGTGAATTCATCAGGCGTTCCAAAGAACATATGAGGTAA 966 0.4234 MSLRFLRSRFFSVASKRFLCTNAAPATPQPSPPSVTSPNRWNFLKYAVIGAFTGTTVLTGYASYAYNLDEIDEKTKSFRESVKYTPTDGATALDKFQGMLYSTAVTVPAKAVELYLDARRLIEEQVRSYTEPYTDKLLPDLLPQEQHVFTLVVDLNETLIHYNWKRDTGWQTFKRPGVDAFLEHLAQFYEIVVYTDEQNMFVDPVIERLDPKHCIRYRLSRPATKYQDGKHYRDLSKLNRNPAKVMYLSGHALESCLQPENAVPIKPWLHTDKDDTALVDFIPFLEFVARSSPADIRPVLQSYQGLDIPSEFIRRSKEHMR 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05193 321 CDD HAD_FCP1-like 149 265 - -
Trre9g05193 321 ProSiteProfiles FCP1 homology domain profile. 144 288 IPR004274 -
Trre9g05193 321 SMART forpap2 147 275 IPR004274 -
Trre9g05193 321 SUPERFAMILY HAD-like 136 301 IPR036412 -
Trre9g05193 321 FunFam Mitochondrial import inner membrane translocase subunit TIM50 135 318 - -
Trre9g05193 321 Pfam NLI interacting factor-like phosphatase 150 297 IPR004274 -
Trre9g05193 321 PANTHER DULLARD PROTEIN PHOSPHATASE 79 308 - -
Trre9g05193 321 Gene3D - 133 318 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05193 Trre-Chr9 57084689 57087719 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05193 K17496 - gmx:100803155 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05193 9 57084689 57087719 Trre9g05193 9 57084689 57087719 ECH