Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05109 ATGGCGGCGACGGCGGATTCCGACGATATCACACCGCCACAAGAGGACTCTACCGACTCCGTCCCTAATTCTTCCGACGCACTCGTTCCCGTCGCACCTGCCGGTCCTGTCGTTTGTTTAAGCCGTTTCGTCACTGATTCCGCCGGCGGCGCTCTCATGGGTTCCGTTTTTGGATACGGTGCAGGATTGTTTAAGAAGAAAGGTTTTAAAGGATCCTTTGCAGATGCGGGGTCTCATGCAAAGACATTTGCAGTTTTGTCTGGAGTTCATAGTTTGGTTATTTGCATCTTGAGAAGGCTTCGAGGAAAGGATGATGTCATTAATGCTGGAGTAGCTGGATGTTGCACAGGACTTGCTCTAAGTTTCCCGGGTGCACCACAAGCTCTTATGCAGAGCTGCCTCACTTTTGGGGCATTTTCTTTTATCATGGAAGGGCTAAACAAACAGCAACCAGCACTTGCACTTCCCATGACCTGGAAAGCAGGGGTGCAACACAATGCACGACCTCCCTTGGTACTCCCCCTTCAATTCCCTCTTCCAAATGAATTGAAAGACGCCTTCTCCTTTTTCTCCGAGTCTTTGAAAAAGCGCAACAAGGGAACTTATCCTACATCTCAATAA 621 0.4911 MAATADSDDITPPQEDSTDSVPNSSDALVPVAPAGPVVCLSRFVTDSAGGALMGSVFGYGAGLFKKKGFKGSFADAGSHAKTFAVLSGVHSLVICILRRLRGKDDVINAGVAGCCTGLALSFPGAPQALMQSCLTFGAFSFIMEGLNKQQPALALPMTWKAGVQHNARPPLVLPLQFPLPNELKDAFSFFSESLKKRNKGTYPTSQ 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05109 206 Pfam Tim17/Tim22/Tim23/Pmp24 family 39 140 - -
Trre9g05109 206 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 10 158 IPR039175 GO:0042721|GO:0045039
Trre9g05109 206 MobiDBLite consensus disorder prediction 1 25 - -
Trre9g05109 206 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05109 Trre-Chr9 56617764 56619906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05109 6 199 Miscellaneous Gene Families AT4G26670 63.959 2.62e-80 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05109 K17790 - gmx:100813557 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05109 9 56617764 56619906 Trre9g05109 9 56617764 56619906 ECH