Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05039 ATGGCTGTAACTGAAGCTCAAAACCCGCTTATTGGAGAAAACACGTGTGGTTCCTTGTTGAAGAAGCTGCAGGAAATATGGGACGAGGTTGGTGAAAGCGACGAGGAACGAGACAAGATGCTTCTTCAGTTAGAGCAGGATTGTTTGGATGTGTACAAGAGAAAGGTTGAGCATGCTGCAAAGTCGAGGGCACAACTACTTCAAGCTTTGTCTGATGCTAAGATTGAGCTTTCTACTCTTCTATCGGCTCTTGGGGAAAAGAGCTTTGCTGGAATTCCTGATAATACTTCTGGAACTATCAAGGAACAGCTTGCAGCTATAGCACCGGCACTTGAACAGTTATGGCAACAAAAGGAAGAAAGAATAAAGGATTTCTCAGATGTACAGTCACAGATCCAAAGAATATGTGGAGAGATAACTGGGAGCTCAAACGTTAATGATGTACCTGTAGTTGATGAGTCTGACCTGACTTTGAAGAAACTTGAAGAATATCAATCTGAGCTTCAAGAACTTCAAAAGGAAAAGAGTGACAGGTTGCAAAAGGTTTTTGAGTTTGTGAGTACTGTGCATGATCTATGTGCTGTCCTTGGTATGGACTTCTTCAGTACCGTAACTGAGGTTCATCCAAGCCTGAATGATTCTACTGGTGGTCAATCCAAAAGCATAAGCAATGACACCCTAGCTAGGCTAGCGAACACAGTATTGACACTGAAAGAAGATAAAAAGCAGAGGCTGCACAAGCTCCAAGAATTAGCTTCTCAGTTAATTGATCTGTGGAATCTAATGGATACTCCTCCAGAGGAAAGGAAATTGTTTGACCATGTTACCTGTAACATCTCAGCTTCTGTTGATGAAGTCACTATTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGGCTGAGATTGAAGTTGAGAGACTGGACCAGCTTAAAGCAAGTAGGATGAAGGAAATTGCTTTCAAGAAGCAAGCAGAACTCGAAGAGATATTTGCCCATGCTCATATAGAAATAGATCCGGAGGCTGCAAGAGAGAAGATTATGACATTGATTGATTCTGGAGATATTGAACCAACTGAATTACTCGCTGACATGGACAATCAAATAGCAAAAGCAAAAGACGAAGCTTTAAGCCGAAAAGATATATTGGACAAGGTTGAGAAATGGATGTCAGCTTGTGAAGAAGAGAGCTGGCTTGAGGACTACAATCGGGATGAGAACAGGTATAATGCAAGCAGAGGTGCACACTTAAACCTCAAACGAGCAGAGAAAGCACGGATACTGGTAAATAAAATTCCCGCTTTGGTTGATACATTGGTTGCTAAAACACGTGTATGGGAAGAGACTCATGATATGTCATTCACATATGATGGTGTTCCTCTTCTAGCCATGTTAGATGAATATGCCATGCTTAGGCATGAACGGGAAGAAGAAAAACGAAGAATGAGGGACCAGAAGAAATTTCAGGAGCAACAAAGCACAGAACCGGAAGTCCCCTTTGGTTCAAGACCCAGCCCTGCTAGGCCACTTAGTGCTAATAAGAAGGTAGGTGGCCCTCGTGCTAATGGAGCCAATGGTACTCCTAACCGACGGCTATCACTTAATGCTCATCAAAATGGAAGCAGGTCCATATCAAAAGATGGAAAAAAGGATATCACTAGACCGGTTGCTCCTGTGAATTATGTGGCTATATCAAAAGAAGATGCTGCATCCCATGTTTCCGGAACCGAACCCATCCCAGCATCACCCTAA 1749 0.4294 MAVTEAQNPLIGENTCGSLLKKLQEIWDEVGESDEERDKMLLQLEQDCLDVYKRKVEHAAKSRAQLLQALSDAKIELSTLLSALGEKSFAGIPDNTSGTIKEQLAAIAPALEQLWQQKEERIKDFSDVQSQIQRICGEITGSSNVNDVPVVDESDLTLKKLEEYQSELQELQKEKSDRLQKVFEFVSTVHDLCAVLGMDFFSTVTEVHPSLNDSTGGQSKSISNDTLARLANTVLTLKEDKKQRLHKLQELASQLIDLWNLMDTPPEERKLFDHVTCNISASVDEVTIPGALALDLIEQAEIEVERLDQLKASRMKEIAFKKQAELEEIFAHAHIEIDPEAAREKIMTLIDSGDIEPTELLADMDNQIAKAKDEALSRKDILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRVWEETHDMSFTYDGVPLLAMLDEYAMLRHEREEEKRRMRDQKKFQEQQSTEPEVPFGSRPSPARPLSANKKVGGPRANGANGTPNRRLSLNAHQNGSRSISKDGKKDITRPVAPVNYVAISKEDAASHVSGTEPIPASP 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05039 582 MobiDBLite consensus disorder prediction 475 490 - -
Trre9g05039 582 MobiDBLite consensus disorder prediction 475 554 - -
Trre9g05039 582 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 506 - -
Trre9g05039 582 Coils Coil 154 181 - -
Trre9g05039 582 Coils Coil 238 258 - -
Trre9g05039 582 Coils Coil 460 491 - -
Trre9g05039 582 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 12 569 IPR007145 GO:0000226|GO:0008017
Trre9g05039 582 Coils Coil 297 317 - -
Trre9g05039 582 FunFam 65-kDa microtubule-associated protein 6 368 501 - -
Trre9g05039 582 Gene3D - 367 501 - -
Trre9g05039 582 MobiDBLite consensus disorder prediction 525 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05039 Trre-Chr9 56187243 56190201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05039 13 547 EF-hand Containing Proteins AT5G62250 42.153 7.49e-127 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05039 K16732 - gmx:100806071 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05039 9 56187243 56190201 Trre9g05039 9 56187243 56190201 ECH