Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05037 ATGGAACTCTGTACTCGTACCTTCAAAACTCTCTTTTTCAACCCTTCTTTCTCTCTTCCTTCTTCTTCTTCAAATTCTCATCTTCTTCGTCTCAACAATACTCTTAAACCCTTCAAATTCAACTCCTTCAATCTCTCATCTTTCATTCAACCTTCTCTTTATCATCACACTTCTTCTCCATTCACTATCTCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCACCAGTTGAACTTTACTCAGAAAATGATCGTCTTCCAGCTAAATTGAAGGTCACTGAAACACCGGAATCCAATTCCAGAGTTAGATTGCATGTGGAGGTGCCACCACTGGTATGCGAGGACTGTTACCAAAGGGTCCTAGTTGAGTTCACGAAGCACGCAAAGATACCTGGATTTCGTCCTGGAAAAACGGTCCCAGAAAGTATTCTTGTTGGTTATGTGGGAACTCAAAATGTTCAAAAGGCTGTGATTGAATCAATATTGAGGAGGACACTTTCACACGCTGTGACAACAGTTACTGGAAGGGCTTTGCAGGACTCTGTACGTATAGTTACTAAATTTTCTGAGATGGAGGAGACATATTCTTCTCACGATCTTCTTAGATATGAAGTCATTGTTGATGTTGCGCCAGAAATCAAATGGATTTCTGATGATGCATACAAAAATTTGAAGGTTGTTGTTGAGATAGACAATGAAATAGATGCTCACATAGCATCTGAAAAAGAATTTAGAAGGCGGTACAAGTCTGCCGGTGTACTAAAAGTTGTTACTGATAGAGGACTACAGGTTGGTGATGTTGTTGTACTTGACATCTCAGCAACAACCATTGATCAAGACGAATCTAATGTCAAAAGTATTCCTTCTGCCGAAAGTAAAGGATTTAACTTTGATACAGAAGATGGTGAAATATTAGTACCAGGTTTCCTTGATTCTATAATTGGAATTGGTCGAGGTGAAACAAAGTCATTCCCCATTGTTTTTCCGGAAACTTGGAAGCAAGAAAGTCTCCGTGGTGTTCATGCTCAGTTTACTGTTGAATGCAAAGAACTTTTTTACAGAGATTTACCAGAGCTGGATGATTCTATTGCTGATAAGCTTATCCCTGGATGCACCACAGTGGAAGAGGTCAAAGAGTTATTGTTAGAGAGATACCAAGAGATAGAGCAAACAGCTAGGGAACAAGCAACCGATAATGCTATACTAGAACATATTTCTAAGCTGGTAGAAGTTGATATACCTCTATCTTTGTTTGAGGAACAAGGTAGACAGCTTTATGGATCCAGCCTATTAGAAATGCAGACAAAAATAAAACTAAATGAGCAGCAGCTAGCTACTTTATCAAGTCCAAAGGCTGTGAATGAATATCTTGAGCATCATAGGGAAAATATAAAAAATTTAATCAAACAGAACCTGGCAGTTGGTGACATATATAGGCGTGAAAATCTGCAGCTTCCTACCGAAGACATCATCAAAGAGGTTGAAAATTCCATTGCTGAATTCAAACGTCAAAAACAAGAGTATGATGAGGAACGTGTAAAAGAACAGGTTCAAGAAATACTAGAAGGAGCTAAGGTGCTTGAATGGTTGAAAGAACATGCAGACATTCAGTATATAACAAGATGA 1623 0.3857 MELCTRTFKTLFFNPSFSLPSSSSNSHLLRLNNTLKPFKFNSFNLSSFIQPSLYHHTSSPFTISASSSSSSSSSPVELYSENDRLPAKLKVTETPESNSRVRLHVEVPPLVCEDCYQRVLVEFTKHAKIPGFRPGKTVPESILVGYVGTQNVQKAVIESILRRTLSHAVTTVTGRALQDSVRIVTKFSEMEETYSSHDLLRYEVIVDVAPEIKWISDDAYKNLKVVVEIDNEIDAHIASEKEFRRRYKSAGVLKVVTDRGLQVGDVVVLDISATTIDQDESNVKSIPSAESKGFNFDTEDGEILVPGFLDSIIGIGRGETKSFPIVFPETWKQESLRGVHAQFTVECKELFYRDLPELDDSIADKLIPGCTTVEEVKELLLERYQEIEQTAREQATDNAILEHISKLVEVDIPLSLFEEQGRQLYGSSLLEMQTKIKLNEQQLATLSSPKAVNEYLEHHRENIKNLIKQNLAVGDIYRRENLQLPTEDIIKEVENSIAEFKRQKQEYDEERVKEQVQEILEGAKVLEWLKEHADIQYITR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05037 540 SUPERFAMILY Trigger factor ribosome-binding domain 89 222 IPR036611 GO:0006457|GO:0015031
Trre9g05037 540 Hamap Trigger factor [tig]. 89 536 IPR005215 GO:0015031
Trre9g05037 540 Gene3D - 249 356 IPR046357 GO:0003755
Trre9g05037 540 Pfam Bacterial trigger factor protein (TF) C-terminus 372 531 IPR008880 GO:0006457|GO:0015031
Trre9g05037 540 FunFam Trigger factor 89 212 - -
Trre9g05037 540 SUPERFAMILY FKBP-like 253 359 - -
Trre9g05037 540 Coils Coil 490 517 - -
Trre9g05037 540 Gene3D - 87 212 IPR036611 GO:0006457|GO:0015031
Trre9g05037 540 FunFam Trigger factor 254 356 - -
Trre9g05037 540 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 52 522 IPR005215 GO:0015031
Trre9g05037 540 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 358 536 IPR027304 -
Trre9g05037 540 Gene3D - 219 535 IPR037041 GO:0006457|GO:0015031
Trre9g05037 540 NCBIfam trigger factor 100 529 IPR005215 GO:0015031
Trre9g05037 540 FunFam Chloroplast trigger factor 335 535 - -
Trre9g05037 540 Pfam Bacterial trigger factor protein (TF) 91 234 IPR008881 GO:0006457|GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05037 Trre-Chr9 56169030 56173757 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05037 K03545 - gmx:100812597 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05037 9 56169030 56173757 Trre9g05037 9 56169030 56173757 ECH