Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05021 ATGATGACGCTGCAAAAAGAAGCGAAGAGACAAAGGAAATTGATCAGTCTGGACAAACCAAGCCTGCAGATCAAACAGAAGAACCGGGATCTATTTCAGATTCTCAAACTGTCAAAAGAAAGTGGTCTTAAACAAACTGTATTTTCTGATTCATATTCAGAGAGCGAATCGTATTTAACCAGGGATGATTTGATTAAGCTTATATCTGAGAAGGAAGAACTTTTTATATTGAAGCAAAAAGAGATTGAGAAAATACAGGATAAATTTCGGCGGACTTATGCAGAGATGGGGACTTTGGAGAAATTTGATATACAGAAATTTGCAAAGAGTTTTCTTGATGTTGCGGATAATGTAGGCAGAGATTCATCAATTGTAAAGAAAAGTGTTTCCAAAATCAATACTTTGAGTGATTCTGCTGAAGCGTCGAAATACCTGAAGACACTTCTGGAAGATCTTAAAATGATAGAGAAACAACATTCAGAGGTAGAGTGTTCTATCTGTATAATTGCAATTATCATAGCATCTAATCTTTATTTTAAAGTTTTCTTTCAAAAATCTGACGAGTCGCGGATCAGTATTAAAATACAGTTTTCCACTGCACTGTAG 606 0.3498 MMTLQKEAKRQRKLISLDKPSLQIKQKNRDLFQILKLSKESGLKQTVFSDSYSESESYLTRDDLIKLISEKEELFILKQKEIEKIQDKFRRTYAEMGTLEKFDIQKFAKSFLDVADNVGRDSSIVKKSVSKINTLSDSAEASKYLKTLLEDLKMIEKQHSEVECSICIIAIIIASNLYFKVFFQKSDESRISIKIQFSTAL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05021 201 Gene3D - 54 162 IPR013805 -
Trre9g05021 201 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 72 158 IPR013805 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05021 Trre-Chr9 56041709 56042390 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05021 K03687 - gmx:100803396 134.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05021 9 56041709 56042390 Trre9g05021 9 56041709 56042390 ECH