Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04997 ATGTCATCTTCTACTACCTTAATAACCATTATGATATTAGTCATTTTCTTTGCAAAGATTGATGTCAAAGCTGCTAAACAATGCACCGATTCATTCAAGAAACTCATCAAACAACGAAACATAACAAAATGCAAAACATTACGAACTCTAGGAGCTGATTTCGGTTGGAATTACTACAATAGCACAAACTCAACAATCACACTTGAAGTATTATTTGGTGCAAAGTTAGATACAATAGAAGGGTGGATAGCATGGGGTGTGAATCCAGGAAAAAGGGCTGAAATGATCGGAACAAAAGCAATCATAGGGATTAAAAGCCATGATTCTGCTACTGGTTCTACATCTTTGACAGTGAATACTTATGATATTACTAAAGAAACTAAAGGTGGTTGTAGTCTTTTACCTACCAATGATCTTGGCCTTGGCCTTAATGTGTCAAATATTGGGATTCAAGATGAAGGGTCAAGTTTTTATACTATATATGCTAAATTGGTTCTGTCTTCTGATGATTATAACATAACAAGGTTGAACCATGTTTGGCAAATTGGAAATGCTATTGATGGAAGACCTTTGAATCATCCAACAACTCTTCACAATGTAGATAGTACTGAGACTATAGACTTGACTTCTACACATGGTGCTAGCATGGGACAATACCGGAGTTTTCTTCGAACGGTACATGGAGTTCTAAACATTATAGGGTGGGGAACATTGTTACCTATTGGAGTAATAGTCCCAAGATACTTTAGAGTGTATCCTTTTAAACGTGAGCCATGGTGGTTTTATTTGCACATTGGTTGCCAATTAACTGGTTTTCTAATTGGTACTGCTGGTTGGGTAATTGGTTTGGTTATTGGACATTCTTCTAAATACTACATCTTCCACACTCATAGAGATTTTGGCATTCTTATTTTCACTTTTAGTACAATTCAGATGTTGGCATTTCGGTTAAAACCCAAGGCAACAGATGATTACAGGAAATATTGGAACATGTATCATCATTTTCTTGGATATGGACTACTAGCTATTATATTCATAAACATATTTAAAGGAATTAACATTTTGCATGGGGCTGTAGGAAGGCATCGTATGGTTGGTCAGTTTAGGGGGTGTATCAGGTATTATCTGGGTATCAAATTTTCCCTCACACGCTACGAATCAGCTTTGTGTGCGAACTTATCTGGTGCAGAAAGCTACTGGTGCAGTTGCCAAGAAAGAGAAGATCCAAAAGAAGATTAA 1239 0.3664 MSSSTTLITIMILVIFFAKIDVKAAKQCTDSFKKLIKQRNITKCKTLRTLGADFGWNYYNSTNSTITLEVLFGAKLDTIEGWIAWGVNPGKRAEMIGTKAIIGIKSHDSATGSTSLTVNTYDITKETKGGCSLLPTNDLGLGLNVSNIGIQDEGSSFYTIYAKLVLSSDDYNITRLNHVWQIGNAIDGRPLNHPTTLHNVDSTETIDLTSTHGASMGQYRSFLRTVHGVLNIIGWGTLLPIGVIVPRYFRVYPFKREPWWFYLHIGCQLTGFLIGTAGWVIGLVIGHSSKYYIFHTHRDFGILIFTFSTIQMLAFRLKPKATDDYRKYWNMYHHFLGYGLLAIIFINIFKGINILHGAVGRHRMVGQFRGCIRYYLGIKFSLTRYESALCANLSGAESYWCSCQEREDPKED 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04997 412 Pfam Protein of unknown function (DUF568) 95 208 IPR045265 -
Trre9g04997 412 CDD Cyt_b561_FRRS1_like 201 356 - -
Trre9g04997 412 Gene3D - 203 383 - -
Trre9g04997 412 SMART 561_7 226 352 IPR006593 -
Trre9g04997 412 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 7 357 - -
Trre9g04997 412 ProSiteProfiles Cytochrome b561 domain profile. 191 385 IPR006593 -
Trre9g04997 412 PIRSF UCP037471 1 373 IPR017214 -
Trre9g04997 412 ProSiteProfiles DOMON domain profile. 50 183 IPR005018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04997 Trre-Chr9 55872954 55881947 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04997 - - gmx:100791697 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g04997 9 55872954 55881947 Trre9g04997 9 55872954 55881947 ECH