Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04907 ATGGCTTCTTCATCATGGAAGCTAGCAACATGTGCAATAATCACGTTCCTCATCTTCACCACCTACCTTCAACTTTCTTCAATGAAATCACCATTTCATCCTCGAGACTTACTTCCTCTTTTGCCCAAAAAAATTTCATGGCCAATCCTCAACTCTCTCCATAGCGCTGTTGATATTCTCCCTGTCTTCGTTGGTGCTGCTTCTTCTCCAAATAACACTCCTGAATGGAAAGGTGCTTGCTTTTACAAGAATCAAGCTTGGATGGAGTTTCATAATAAAACTGGTTCGGAATTTGGTGGTGGTACCCTTCACTTAAAGGTTAGTGATGCTCATAGTTGGACATGTATGGATATTTACATTTTTGCAACCCCATATCGGGTAACATGGGATTATTATTTTCTGGCCCGGGAGCATACACTTGAGATCAAGGAATGGGATGGGAAAGCCGAGTATGAGTATGTGAAAAATCACGGGTTATCAATATTCCTCATGAAAGCTGGAATGTTGGGGACCCTTCAAGCACTTTGGGAGGTCTTCCCTTTATTTACCAATACTGGATGGGGAGAGAACTCAAATATCGGGTTTCTGGAGAAACATATGGGAGCCTCTTTTGAAACACGTCCTCAGCCGTGGGTTACAAATATCAGTGTTGATGACATCCACTCTGGAGATTTCCTTGCCGTTTCAAAAATCCGAGGTCGCTGGGGTGCTTTTGAGACTCTAGAGAAATGGGTTAGTGGTGCTTACGCTGGTCATACTGCTGTTTGCTTAAGAGATTCAGATGGAAAGCTTTGGGTTGGGGAGTCGGGACATGAAAATGAAGAGGGAGATGATATAATTGCTATGATACCGTGGGATGAGTGGTGGGACTTTGAACTGAATAAAGATGATTCTAATCCCCATATTGCACTGCTTCCTTTACACCCTGACATGCGTGCCAGGTTTAATGAGACTGCTGCGTGGGAGTATGCACTGAGTATGGCAGGACAACCTTATGGTTACCATAACATGATTTTCAGTTGGATAGACACTTTAACTGGGAACTATCCACCTCCCTTGGATGCTAATGTGGTTGCTTGTGTTATGACAATTTGGAGTCAACTCCAACCTGCATATGCTGCAAATATGTGGAATGAAGCCTTGAACAAACGACTTGGAACTAAAGGGCTTGACCTTCCAGAAGTTTTAGTAGAAGTTGAAAAACGTGGATCATCATTTGATGAACTACTGACGATTCCAGAACAGGATGACTGGACCTACAGCGATGGCAAGTCAACTTCTTGTGTTGCTTTTATACTTGCAATGTACAAAGAGGCTGGATTGTTTGATCCAATTGCTAGTTCTATCCAAGTTACAGAGTTTACGATAAAAGATGCTTACATTCTCAATTTTTTTGAGACCAATTCTAGTCGCTTGCCAACATGGTGCAATGACGGAGACACCGTGAAGCTTCCTTATTGTCAGATTAAAGGCAAGTACCGTATGGAGTTACCAGGATACAATACTATGCAACCATATCCTCACATGAATGAAAGGTGCCCATCTCTTCCCACAAAGTACTCCAGAACCAAGAATTGCTAG 1581 0.4257 MASSSWKLATCAIITFLIFTTYLQLSSMKSPFHPRDLLPLLPKKISWPILNSLHSAVDILPVFVGAASSPNNTPEWKGACFYKNQAWMEFHNKTGSEFGGGTLHLKVSDAHSWTCMDIYIFATPYRVTWDYYFLAREHTLEIKEWDGKAEYEYVKNHGLSIFLMKAGMLGTLQALWEVFPLFTNTGWGENSNIGFLEKHMGASFETRPQPWVTNISVDDIHSGDFLAVSKIRGRWGAFETLEKWVSGAYAGHTAVCLRDSDGKLWVGESGHENEEGDDIIAMIPWDEWWDFELNKDDSNPHIALLPLHPDMRARFNETAAWEYALSMAGQPYGYHNMIFSWIDTLTGNYPPPLDANVVACVMTIWSQLQPAYAANMWNEALNKRLGTKGLDLPEVLVEVEKRGSSFDELLTIPEQDDWTYSDGKSTSCVAFILAMYKEAGLFDPIASSIQVTEFTIKDAYILNFFETNSSRLPTWCNDGDTVKLPYCQIKGKYRMELPGYNTMQPYPHMNERCPSLPTKYSRTKNC 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04907 526 Gene3D endopeptidase domain like (from Nostoc punctiforme) 216 456 - -
Trre9g04907 526 PANTHER OS01G0793500 PROTEIN 20 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04907 Trre-Chr9 55403171 55408213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04907 - - gmx:100789468 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g04907 9 55403171 55408213 Trre9g04907 9 55403171 55408213 ECH