Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04067 ATGGCTTCTTCTCCACATGTCTTGAAACGCACAAATTCTATAGTTGATAACATGCCTGATGCATTGAAGCAGAGTAGGTACCATATGAAGAAATGCTTTGCTAAGTACCTAGAGAAGGGTAGAAGGGTCATGAAACTTCATGATTTGATGGAAGAAGTTGAACGAACTATAGATGATAAAATTGAAATAAATCATGTTTTGGAGGGCAATCTTGGCTTCATATTGAGCTCTACACAGGAAGCAGTTGTTGAGCCACCATATGTTGCCTTTGCAATTAGGCCTAATCCAGGAGTTTGGGAATATGTACGTGTCAACTCTGAGGACCTTTCTGTTGAGCCTATCACCTCCACTCAATACCTCAAATTCAAGGAAAGGGTATATGATGAAAAATGGGCAAATGATGAAAATGCATTTGAAGCAGACTTTGGAGCATTTGATATTGGGATTCCAAAATTAACTCTATCTTCTTCAATTGGAAATGGACTACACTTTGTTTCAAAGTTCTTAACTTCAAGAACAACAGGGAAATTGGCAAAAACACAGGCTATAGTGGACTACTTGTTGAAACTAAATCATCATGGAGAAAGCTTAATGATAAATGACACCTTGAGCTCAGCTGCAAAGCTTCAGATGGCATTAATAGTGGCTGATGTTTTCCTCTCAGCACTTCCAAAAGACACTGCATATCAGAAATTTGATCTAAGGTTAAAGGAATGGGGGTTTGAGAAGGGATGGGGAGATACTGCAGAAAGAGTGAAGGAGACAATGAGAACTTTATCAGAAGTACTCCAAGCTCCAGACCCAATGAATCTCGAGAAATTTTTCAGCAGGATTCCTACAATATTCAAAGTAGTGATCTTCTCGGTTCATGGTTATTTCGGGCAAGCAGATGTTCTTGGCTTGCCCGACACCGGTGGCCAGGTAGTTTACATATTAGACCAAGTCAAGGCTTTGGAGGAAGAGTTACTTCTAAGAATTAAGCAACAAGGACTAAATTATAAACCTCAAATTCTTGTGGTGACAAGGTTGATACCTGATGCTAGAGGAACCAAGTGCCACCAAGAGTTTGAACCAATCATTGATACAAAACACTCGCATATTCTACGCGTGCCTTTCTATACAGAGAAAGGAATCTTGCGCCAATGGGTTTCTCGCTTCGACATTTATCCCTATCTTGAGAGGTTTACTCAGGACGCAACAATCAAAATTTTGGACCTAATGGAAGGGAAACCGGATCTAGTTATTGGAAATTACACCGATGGAAATTTGGTAGCATCGTTAATGGCTAAAAAACTTGGGATAACTCAGGCAACTATAGCACATGCTTTAGAGAAAACAAAGTATGAAGACTCAGATGTTAAATGGAAAGAGTTAGATCCTAAATATCACTTCTCATGTCAGTTCATGGCCGATACAGTTGCAATGAATTCATCTGATTTCATCATAACCAGCACATACCAAGAAATTGCTGGAAGCAAAGATAGACCTGGACAGTATGAAAGCCATGCGGCGTTTACTCTTCCGGGGCTTTGTAGGGTTATTTCGGGGATAAATGTGTTTGATCCTAAGTTCAATATAGCTTCACCAGGTGCTGATCAAAGTATCTATTTCCCTTACACGGAAAAAGATAAAAGACTCTCTCAATTTCACCCTGCCATTGAAGATCTTCTCTTTAATAAAGTCGATAATAATGAGCATATTGGATACCTAGCAGATAAGAAGAAACCAATAATCTTCTCAATGGCGAGGCTTGATGTTGTGAAGAACTTAAGTGGATTAGTCGAATGGTATGCGAAGAGTAAGAGACTAAGAAACTTGGTGAATCTTGTTATAGTTGGTGGCTTCTTTGACCCTTCAAAATCAAAAGATAGGGAGGAAATGGCAGAAATAAAAAAGATGCATGATTTAATCGAAAAGTATCAACTAAAGGGCCAATTCAGATGGATTGCTGCGCAGACTGATCGATATCGCAATGGAGAGCTTTATCGCTGCATTGCTGACACAAAGGGAGCTTTTGTACAGCCTGCTTTGTATGAAGCATTTGGATTAACTGTCATCGAAGCAATGAACTGCGGCTTGCCAACTTTTGCTACTAACCAAGGAGGTCCGGCAGAAATAATTGTTGATGCTGTCTCAGGATTCCACATTGATCCTCTCAATGGAGATGAATCAAGCAATAAAATTGCTGATTTCTTTGAAAAATGCAAAGTAGATCCATCATATTGGAGCGTGATCTCTGCATCCGGTTTGCAGCGCATAAATGAATGCTATACATGGAAGATCTATGCAAACAAGTTGGTAAATATGGGAAACATTTACACCTTTTGGAAGCAAGTTAACAAGGAGCAAAAAGAGGCAAAACAAAGATACATCCATATGTTTTATAATTTCTTATTCAAGAATTTGGTTAAGAATGTACCTATTCCAAGTGATGAACCTCCAAAACCAGTAGGCAAGCAACCAAGTCTCAAACAACTGGGCACTAGCACCAGACGTTCACAATCAACATTGAGGAGGTTATTACTTGGATCATAA 2535 0.3929 MASSPHVLKRTNSIVDNMPDALKQSRYHMKKCFAKYLEKGRRVMKLHDLMEEVERTIDDKIEINHVLEGNLGFILSSTQEAVVEPPYVAFAIRPNPGVWEYVRVNSEDLSVEPITSTQYLKFKERVYDEKWANDENAFEADFGAFDIGIPKLTLSSSIGNGLHFVSKFLTSRTTGKLAKTQAIVDYLLKLNHHGESLMINDTLSSAAKLQMALIVADVFLSALPKDTAYQKFDLRLKEWGFEKGWGDTAERVKETMRTLSEVLQAPDPMNLEKFFSRIPTIFKVVIFSVHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLNYKPQILVVTRLIPDARGTKCHQEFEPIIDTKHSHILRVPFYTEKGILRQWVSRFDIYPYLERFTQDATIKILDLMEGKPDLVIGNYTDGNLVASLMAKKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFMADTVAMNSSDFIITSTYQEIAGSKDRPGQYESHAAFTLPGLCRVISGINVFDPKFNIASPGADQSIYFPYTEKDKRLSQFHPAIEDLLFNKVDNNEHIGYLADKKKPIIFSMARLDVVKNLSGLVEWYAKSKRLRNLVNLVIVGGFFDPSKSKDREEMAEIKKMHDLIEKYQLKGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDAVSGFHIDPLNGDESSNKIADFFEKCKVDPSYWSVISASGLQRINECYTWKIYANKLVNMGNIYTFWKQVNKEQKEAKQRYIHMFYNFLFKNLVKNVPIPSDEPPKPVGKQPSLKQLGTSTRRSQSTLRRLLLGS 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04067 844 FunFam Sucrose synthase 532 759 - -
Trre9g04067 844 Pfam Glycosyl transferases group 1 565 733 IPR001296 GO:0016757
Trre9g04067 844 Pfam Sucrose synthase 10 558 IPR000368 GO:0005985|GO:0016157
Trre9g04067 844 NCBIfam sucrose synthase 27 807 IPR012820 GO:0005985|GO:0016157
Trre9g04067 844 Gene3D - 151 280 - -
Trre9g04067 844 PANTHER - 8 811 IPR012820 GO:0005985|GO:0016157
Trre9g04067 844 FunFam Sucrose synthase 151 280 - -
Trre9g04067 844 Gene3D - 12 150 - -
Trre9g04067 844 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 300 768 - -
Trre9g04067 844 Gene3D Glycogen Phosphorylase B; 532 759 - -
Trre9g04067 844 MobiDBLite consensus disorder prediction 810 835 - -
Trre9g04067 844 Gene3D Glycogen Phosphorylase B; 285 802 - -
Trre9g04067 844 FunFam Sucrose synthase 13 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04067 Trre-Chr9 48644692 48651141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04067 8 812 Glycosyltransferase AT4G02280 56.522 0.0 974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04067 K00695 - gmx:100792097 1478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g04067 9 48644692 48651141 Trre9g04067 9 48644692 48651141 ECH