Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03528 ATGGCGACGTTTGAACTTTATCGTAGGTCGGAGATCGGAACGTGCCTTACTGAGACTTTGGATGAGATGGTTCAGAGTGGAACTCTTAGTCCTGAGCATGCGATTCAGATTCTTGTTCAGTTTGATAAGTCTATGACTGAAGCTCTGGAAACAAAGGTTAAGAGCAAAGTTTCTATCAAGTTTCTATCAAGGAAACACTGCTTGCTGATTGCTGTTTTGAGCTCTAGCTATTTGTAG 237 0.4177 MATFELYRRSEIGTCLTETLDEMVQSGTLSPEHAIQILVQFDKSMTEALETKVKSKVSIKFLSRKHCLLIAVLSSSYL 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03528 78 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 1 60 IPR003194 GO:0005672|GO:0006367
Trre9g03528 78 Pfam Transcription initiation factor IIA, gamma subunit, helical domain 4 49 IPR015872 GO:0005672|GO:0006367
Trre9g03528 78 FunFam Transcription initiation factor IIA subunit 2 2 54 - -
Trre9g03528 78 SUPERFAMILY Transcription factor IIA (TFIIA), alpha-helical domain 4 54 - -
Trre9g03528 78 Gene3D - 3 54 IPR009083 GO:0005672|GO:0006367
Trre9g03528 78 CDD TFIIA_gamma_N 4 51 IPR015872 GO:0005672|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03528 Trre-Chr9 44041998 44042430 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03528 K03123 - pvy:116137693 105.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03528 9 44041998 44042430 Trre9g03528 9 44041998 44042430 ECH