Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03521 ATGGTAGTTTCAGCCATCAATTTCCTCATCGTCTTTTTCCTCTTCTGTGTTGCACTTGCTCTCACATTCATATTTTCTTCTGCATTGCTGTCTTGGATTTTGAGCCGTGTTTTAAAAGCATCTGTTGAATTTTGTGTTGGTGGATGCAGCAGTTTACAAGATGTGGTCATCAAGTTTGAACAGGGTGCCACTGAATCTGTATCTATTGGTGAAATTAAACTCAGCTTAATCCATTCCCCTGTCGAACATGGTGCGGACGTTGGTTCTTGGAATCCAAAGTTGCAATTATTAATACGCAACTTAGAAGTTGTTACGAGGCCTACGATTAAAAGCTCTGGGAAGAAGAAAACCCAGAAAACCCAAAAATCCAAATCCAAATCCAAAACTCGTTCTTTTGGCAAGGGAAAGTGGAGGACTGTTGTCAATATTGCAAGATATTTTTCTTTTTCTTTGACAGAGTTAGTTCTAAAGACACCTAAAGGTACTATTGGAATCGGGAAGGTGAATGTTGATATATCTAAAGGCGGTGGATCCGAGTCAAATTTGTTTATTAGTGTACATATATTGCCCATTGTGGTTCACATTGGTGATCCTCAAGTTAGTTGTGATCAATTATCTGAATTTAGTGGTGGGGGATCCAGTGTTTCTAGCCAGGCATCTGTTGTGCCAATAGAAAAGTCTTCTACTCCTTTTATCTGTGAAAAATTCTTCATCTCATGTGAATTTGGTCATCGTAGGGATATTGTTATTAAGAATGTGGATATATCCATTGGAGAAGTTACTGTGAATTTGAATGAACGGTTGCTTGCAAAAAAAAAGAGGCCATCAGAATCTCCATCCGGCTCTGATAGAAGTAAAGGGTCAAACATCGATCCTATGAGCACTAAACCGTCTTCAACGAAGGAAGAAAAACTAGAACGCATCATTTCTTTGTTTCCGGAGAAGGTGGGCTTCAATCTACCAAAGTTGAATGTGAGTTTTGAGCATTGTGAATATGGTCTTTCTGTTGAAAATAACATCACTGGCATCCAATTTAGTAGCGTCAAATCACGCTCCAATAAGGATATTGGGGAGAGTACACGCTTCCATTTTCAATTGGAGTTCAGAGAAATTCATCTTCTTAGAGAAGCTGGTGCTTCTGTCCTGGAGATAACGAAGGTGAATTTGGTCTCCTTTGTGTGTGTCCCAGTGCAGTCAATCTCACTTGTTAGAGCTGAAACTGAAATCAAGCTTGGACGTTCACAATGCAACATCATAATGAGCAGATTGAAGCCTTTGTTGCTCCTCCGCTCCTCCAAAAAGAAAAAAGTGGTACTTCGAGAGGAAGCTCCTGTTGTAAAACCGAAATCAAATGATAACAAGACCATTACATGGACATGTAAATTTTCAACTCCTGAGATAACAATTATGCTTTATAATATGGCTGGTTTTCCGGTGTATCATGGTTGCTTACAATCACCGCATATATTTGCAAACAACATTTCAAATATGGGGACTTCAGTACACGTTGAACTTGGTGAGTTCAATCTCCAGTTGGCTGATGAAAATAAAGACTGGTTGAAAGAAAGCATTTTTGGCGTGGAATCAGATTCTGGCTCCATTATACACATTACAAAGGTTAGTTTGGATTGGGGCAAAAAGGACATGAAATTCTCTGAAGAAGATGGTCCCAGGTGTATTCTAGGTTTAGCAGTTGATGTTACTTGCATGGGAATTTATCTAACCATCAAGCGTTTAGAATCATTAATATCAACAGCTATATCCTTTCAAGCTTTAATGAAAAGCTTCTCTTCAAAGAAAAAATCAACTCAAAGCCGAGGGCGTTCATCAAAACCTTCGGCTAAGGGAACTCAAATGTTGAAATGCAATCTTGTACAGTGTTTAGTATATGTACTGGGGGAGACTGGATTAGAAAATACAGTTGTTCTAGATCCCAAGCGAGTTAATTATGGTTCACAGGGTGGCAGAGTTATAATAAACGAGTCGGAAGACGGTACCCCTCGCACTGCAAAGATAGTATCCACTGTTTCTGATGACTACCAAAAACTAAAGTACTGTATCTCTCTTGAAATATTTCAAATCAAGTTATGTGTAAACAAGGTGAAACAATCCACACAGATAGAACTTGAAAGGGCCAGATCTATCTATCAGGAATATGTGGAGGAAAATAGGCCGATGACAAAGGTGGCATTAGTTGATATGAAAAATATTAAATTTGTAAAACGCTTAGGTGGCGTCAAAGAGAATTCAGCTTCTTCTCTTTTCAGTGCAACTGACATTACAATGAGGTGGGAGCCTGATGTTCATCTATCACTAATTGAACTTGTTCTCCAGCTGAAACTAGTTGCACACAATAAGAAGCTTGAGGAACGTGGTAATGAACACGTGGAAGGTTCATCTAATGTAAGAGACGCTAACTGCAAAAATGAAGCTACCATGGAATCAAGAAATCTTGAAAAGAAGAAAGGTACTATTTTTGCTGTTGATGTGGAAATGTTGAATATATCGGCTGAGCTAGGAGATGGAGTTGATGCTATGGTTCAAGTTCAGTCAATTTTCTCTGAAAATGCTAGTATAGGAGTGCTCTTTGAACGACTAATAATTAATATTTGTGGGGCCAGAATCTTGAAGAGTAGTAGGATGCAAATTTCACGAATTCCTAGTATATCTGCTAGTTCATCTGATGCAAAGGGACCTGTTGTCACAACATGGGACTGGGTAATTCAAGGTCTTGACGTTAACATTTGTTTGCCATACAGATTGCAATTGCGTGCTATTGATGATGCTTTTGAGGATATGATGCGAGCTTTAAAGCTTATTGTGGCAGCAAAGTCTAATTTGATTTTTCCTGTGAAAAAAGATAGTTCTAAAGTAAAAAAACCCAGTTCATCAAAATTTGGATGCATAAAGTTTTTCTTACGCAAGTTAACTGCTGACATTGAAGAGGAACCAATCCAGGGATGGCTTGATGAACATTACCAGATGTTGAAGAAGGAAGTTGGTGAGTTAGTTGTCCGGTTAAACTTTCTAGATGAATTTATATCGAAGGCCAAGCAAGATCCAAATTCTTCTGATGACTTAAATAATTCTTCCCAAGATGGAAAAGTTTATTTTAATGAAGTGGAGGTTGATGTAAACAATTCTTCAATTATTGAATCCATGAGAGAAGAAATTTACAAACGTTCATTCCGTTCATATTACGAGGCATGCCAGAAGTTAGTGTTTTCTGAAGGCTCAGGTGCTTGTAGGGATGGCTTTCAATCTGGTTTCAAACCCAGTGCTTCAAGGTCTTCTCTTTTTACGATATCTCTATCAGACTTAGATGTAAGCCTCACAAAAATTGATGGTGGAGATGCTGGGATGATTGAGTTTCTGAGGAAACTTGACCCTGTTTGTCTTGAATGTGATATACCATTTTCCCGACTTTATGGGGCAAATCTTCTCTTAAACACGGGTTCTCTTGTGGCTCAGCTTCGAAATTACACATTTCCTCTATTTTCTGGAAATTCTGGCAAATGTAAAGGTTCTCTTGTGTTGGCTCAGCAGGCAACTAGCTTTCAACCTCAAATGCTTCAAGATGTCTATGTCGGGCGATGGAGGAAGGTGTTCATGCTTCGATCAGCTAGTGGTACAACTCCACCCATGAAGACATACTCAGATTTGCCAATACATTTTCAGAAAGGCGAAGTGTCATTTGGGGTGAGTTATGAACCAGTTTTTGCTGATCTTAGTTATGCTTTCACCGTGGTGCTACGGAGGGCTAATCTAAGTATTATGAATCCTGGCCCACTTATTCTGCCACCGAAAAAGGAGAAAAGTTTGCCATGGTGGGATGACATGAGAAATTACATTCATGGAGGAATTTCCTTGTTATTTTCTGAAACTATATGGAACATTTTGGCCACTACAGATCCTTATGAAAAGCTTGATAAACTTCAAATTGTGACTAGCTCTATGGAAATTCACCAGTCAGATGGTCGTATTCTAGTTTCTTCAAAAGATTTCAAGATTTTTTTGAGTAGTTTGGAAAGTTTGGCAAACAAACGTGGTTCTAAACTTCCTGATGGTGTCATCTGTTATTCATTTTTGGAAGCTCCCATCCTTACAATTGAAGTTACAATGGACTGGGGTTGTGACTCAGGAAAACCCTTGAATCATTATTTATTTGCACTTCCAGTTGAAGGGAAGCCTCGTGAATTTGTATTTGATCCCTTCAGATCCACTGCTCTTTCCATTGGATTGAACCTATCTCTTGGAAATGTTACTGTATCTCATTCTCCTAACATTTGTCAGAATGTTTCACCGGCTTCCCCAACAATAAAACTCGGTGCTCATGATCTAGCATGGCTTGTAAGATTCATTTTCTTGAACTACCTACCTCCACATAAACTTCGCACCTTCTCACGATGGCCTCGTTTTGGAGTTCCAAGAATTGTCAGATCAGGCAATCTTCCACTTGATAAAGTGATGACCGAATTTATGATGCGTATAGATTCCACACCATTCTGTATAAAGAACATGCCCTTACATGATGATGATCCAGCGAAAGGACTGACCTTCATGATGAGAAAGTTGAAGCTTGAATTATATTTTAGTAGGTGCCAGCAACATTATACTTTTGAAACCAAACGTGAACTTCTTGATCTTGTTTACCAAGGTATTGACCTTCATATGCCCAAGTGTTTCCTAAGTAAAGGAGATTGCGAATCAGCTTGTGTGATACCAAAAAGTTTACAATCTGCATCTGAGCAAAAAATTCCCTCTGAAAAGGGTTATTTGGCACAGAAAAATCACGATGATGGATTTCTGCTATCTTGTGATTACTTTACCATACGAAAACAGTCTCCAAAGGTTGATCATGCCAGTTTATTAGCCTGGCGTGAATCCGGAAGAAGAAATGTTGAGAAAACCTATGCACAGTCTAACTGTGAAAAACAAAGTGAAAATGATGAGCATATGCCAGCAGACCCCAGCGATGATGATGGATACAATGTGGTTATAGAGGATGATGGGTACAATGTGGTTGTAGCTGACAATTGCCGGCGTGTGTTTGTCTATGGTCTAAAGCTTTTGTGGAATATTGAAAATAGAGATGCAGTTTGTTTCTGGGTTGGGGGTCTAACCAAAGCTGCTTCACCTGCCAAGCCTTCTCCTTCCCGGCAGTATGCACAGAGAAAATTATATGAGAAAAACAACCAGCAGCAAGATGGAACTGAAACTAGTCAAGATGATGCATGTGAAACCCATCAAGATAATGAAACTGAAATGCACAAAGATGACGGAGTTGAAATCCATAAAGATGAAGGAGTTGAAACCCATAAAGATGAAGGAGTTGAAACTCACAAAGATGAAGGAGTTGAAACTCATAAAACTGTAGGAGTTGAAACCCATCAAGATGAAGATAGTAAGTTCCTTCCCGCTGGTAACATCTCAGATTCTCCCTCTTCTATGGCTGCCAGTACTTCTGAGTTCCCTTCATTCCCATCACATTCACTTAAGTTGGACAGCTTACCATCTGCTAAATATGAAAATACAGACGAATCGGAGGAGGGGACTCGACACTTCATGGTTAATGTTATTGAACCACAATTTAATCTTCACTCGGAGGGTGCAAGTGGTAGGTTTTTGCTTGCTGCTGTAAGTGGACGTGTTTTAGCCCAATCATTTCATTCAGTTCTTCATGCTGGCCATGACATGATTGAGAAAGTGTGTGGTACAACAGATGAGCATATTGGTGAATATCAGCCTGAAATTGCATGGAAAAGAATGGAGATGTCTGTTATGTTGGAGCATGTGCAGGCGCATGTAGCACCAACAGATGTTGATCTAGGGGCTGGAGTGCAGTGGCTACCAAAAATTATTAGAGGCTCTCCAAAAGTAATGCGTACAGGTGCACTTCTTGAGAGAGTTTTTATGCCTTGTGACATGTACTTTCAGTTAACGAGGCACAAAGCGGGCTCTCCAGAAGTGAAGGTGAAGCCCTTGAAGGAGGTCAAGTTCAATTCTCATAATATTACAGCAGCAATGACATCTCGCCAGTTTCAAGTCATGTTGGATGTGTTAACCAATCTTCTACTTGCCCGGCTTCCAAAGCCTCCAAAAAGTAGCCTGGCACTTTCTGTTGAAGATGATGAAAATGTCGAAGAGGAAGCAGATGAGGTGGTTCCTGATGGTGTTGAAGAAGTGGAACTTGCAAAAATCGATGTCGAAAAGAAAGAGAGGGAACAAAATTTGCTTCTTGATGATATGAAAAAGTTGTCTTTTTGGTGTGACCCTGCCAAAGATATGCAACCAGAAAAGGAACCAGAGTTGTGGATGATATATGGTGGAATAGCCATGCTGGTCCAAGGACTGAAGAGAGAAGTTGTAACTGCACAAAAATCCAGGAAGGAAGCACATGCATCATTAAGAATGGCTATGCAAAAAGCTGCACAGGTGCATCTAATGGAAAAGGAGAAGAACAAAAGTCCTTCCTTTGCTATGCGCATATTTTTGCAAATTAACAAAGTTGTTTGGAGCATGCTTCTTGATGGTAAACCCTTTGCTGAAGCCGAAATCAATGACATGATCTATGACTTCGACCGAGATTATAAGGATGTGGGTGTTTCTCGGTTTACGACCAAATATTTTGTTTTCAAAAATTGTCTTCCAAATGCCAAATCTGATATGATTTTGTCGGCGTGGAATCCTCCAGCTGAATGGGGAAAATTGTCGTTATCAGACACTTGGATCATGCTCCATATGTCAAATCTTGGGCGTGAGGGGTGTGTTAAGAGTCCCGACATTGGATGA 6792 0.3974 MVVSAINFLIVFFLFCVALALTFIFSSALLSWILSRVLKASVEFCVGGCSSLQDVVIKFEQGATESVSIGEIKLSLIHSPVEHGADVGSWNPKLQLLIRNLEVVTRPTIKSSGKKKTQKTQKSKSKSKTRSFGKGKWRTVVNIARYFSFSLTELVLKTPKGTIGIGKVNVDISKGGGSESNLFISVHILPIVVHIGDPQVSCDQLSEFSGGGSSVSSQASVVPIEKSSTPFICEKFFISCEFGHRRDIVIKNVDISIGEVTVNLNERLLAKKKRPSESPSGSDRSKGSNIDPMSTKPSSTKEEKLERIISLFPEKVGFNLPKLNVSFEHCEYGLSVENNITGIQFSSVKSRSNKDIGESTRFHFQLEFREIHLLREAGASVLEITKVNLVSFVCVPVQSISLVRAETEIKLGRSQCNIIMSRLKPLLLLRSSKKKKVVLREEAPVVKPKSNDNKTITWTCKFSTPEITIMLYNMAGFPVYHGCLQSPHIFANNISNMGTSVHVELGEFNLQLADENKDWLKESIFGVESDSGSIIHITKVSLDWGKKDMKFSEEDGPRCILGLAVDVTCMGIYLTIKRLESLISTAISFQALMKSFSSKKKSTQSRGRSSKPSAKGTQMLKCNLVQCLVYVLGETGLENTVVLDPKRVNYGSQGGRVIINESEDGTPRTAKIVSTVSDDYQKLKYCISLEIFQIKLCVNKVKQSTQIELERARSIYQEYVEENRPMTKVALVDMKNIKFVKRLGGVKENSASSLFSATDITMRWEPDVHLSLIELVLQLKLVAHNKKLEERGNEHVEGSSNVRDANCKNEATMESRNLEKKKGTIFAVDVEMLNISAELGDGVDAMVQVQSIFSENASIGVLFERLIINICGARILKSSRMQISRIPSISASSSDAKGPVVTTWDWVIQGLDVNICLPYRLQLRAIDDAFEDMMRALKLIVAAKSNLIFPVKKDSSKVKKPSSSKFGCIKFFLRKLTADIEEEPIQGWLDEHYQMLKKEVGELVVRLNFLDEFISKAKQDPNSSDDLNNSSQDGKVYFNEVEVDVNNSSIIESMREEIYKRSFRSYYEACQKLVFSEGSGACRDGFQSGFKPSASRSSLFTISLSDLDVSLTKIDGGDAGMIEFLRKLDPVCLECDIPFSRLYGANLLLNTGSLVAQLRNYTFPLFSGNSGKCKGSLVLAQQATSFQPQMLQDVYVGRWRKVFMLRSASGTTPPMKTYSDLPIHFQKGEVSFGVSYEPVFADLSYAFTVVLRRANLSIMNPGPLILPPKKEKSLPWWDDMRNYIHGGISLLFSETIWNILATTDPYEKLDKLQIVTSSMEIHQSDGRILVSSKDFKIFLSSLESLANKRGSKLPDGVICYSFLEAPILTIEVTMDWGCDSGKPLNHYLFALPVEGKPREFVFDPFRSTALSIGLNLSLGNVTVSHSPNICQNVSPASPTIKLGAHDLAWLVRFIFLNYLPPHKLRTFSRWPRFGVPRIVRSGNLPLDKVMTEFMMRIDSTPFCIKNMPLHDDDPAKGLTFMMRKLKLELYFSRCQQHYTFETKRELLDLVYQGIDLHMPKCFLSKGDCESACVIPKSLQSASEQKIPSEKGYLAQKNHDDGFLLSCDYFTIRKQSPKVDHASLLAWRESGRRNVEKTYAQSNCEKQSENDEHMPADPSDDDGYNVVIEDDGYNVVVADNCRRVFVYGLKLLWNIENRDAVCFWVGGLTKAASPAKPSPSRQYAQRKLYEKNNQQQDGTETSQDDACETHQDNETEMHKDDGVEIHKDEGVETHKDEGVETHKDEGVETHKTVGVETHQDEDSKFLPAGNISDSPSSMAASTSEFPSFPSHSLKLDSLPSAKYENTDESEEGTRHFMVNVIEPQFNLHSEGASGRFLLAAVSGRVLAQSFHSVLHAGHDMIEKVCGTTDEHIGEYQPEIAWKRMEMSVMLEHVQAHVAPTDVDLGAGVQWLPKIIRGSPKVMRTGALLERVFMPCDMYFQLTRHKAGSPEVKVKPLKEVKFNSHNITAAMTSRQFQVMLDVLTNLLLARLPKPPKSSLALSVEDDENVEEEADEVVPDGVEEVELAKIDVEKKEREQNLLLDDMKKLSFWCDPAKDMQPEKEPELWMIYGGIAMLVQGLKREVVTAQKSRKEAHASLRMAMQKAAQVHLMEKEKNKSPSFAMRIFLQINKVVWSMLLDGKPFAEAEINDMIYDFDRDYKDVGVSRFTTKYFVFKNCLPNAKSDMILSAWNPPAEWGKLSLSDTWIMLHMSNLGREGCVKSPDIG 2263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03521 2263 MobiDBLite consensus disorder prediction 108 131 - -
Trre9g03521 2263 Pfam Golgi-body localisation protein domain 1970 2245 IPR019443 -
Trre9g03521 2263 MobiDBLite consensus disorder prediction 1729 1834 - -
Trre9g03521 2263 PANTHER ANTIGEN MLAA-22-RELATED 7 2236 IPR045167 -
Trre9g03521 2263 Pfam RNA pol II promoter Fmp27 protein domain 1208 1307 IPR019441 -
Trre9g03521 2263 Coils Coil 702 722 - -
Trre9g03521 2263 MobiDBLite consensus disorder prediction 792 814 - -
Trre9g03521 2263 MobiDBLite consensus disorder prediction 271 302 - -
Trre9g03521 2263 MobiDBLite consensus disorder prediction 281 296 - -
Trre9g03521 2263 MobiDBLite consensus disorder prediction 1808 1833 - -
Trre9g03521 2263 MobiDBLite consensus disorder prediction 1742 1802 - -
Trre9g03521 2263 MobiDBLite consensus disorder prediction 1638 1661 - -
Trre9g03521 2263 SMART Fmp27_GFWDK_2 1160 1308 IPR019441 -
Trre9g03521 2263 MobiDBLite consensus disorder prediction 112 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03521 Trre-Chr9 43975706 43994113 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03521 - - cam:101507025 3489.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03521 9 43975706 43994113 Trre9g03521 9 43975706 43994113 ECH
Trre9g03521 9 43975706 43994113 Trre5g04604 5 48021818 48049872 PCT