Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03489 ATGATACGTAACATTGCCAATCTTGTACCTATGATGAAGAATGGACCATCAGAGTGTAATGCTGCTCTTCAGTTTGCAGTAACTACTCTTCAGGTTGAGAATATATTAGTCATTGGTCATAGTAGTTGTGCTGGAATTGAAGCTCTAATGAGAATGCAAGAAGATACAGAACCAAGAAACTTCATACACAATTGGGTTGCCAATGGGAAAGTTGCCAAATTGAAGACTAAAGCTGCCACATCTCATCTTAGTTTTGATCAACAGTGCAGATTTTGTGAGAAGGAATCAATTAACCAATCATTATTAAACTTGCTAAGTTATCCATGGATAAAAGATAGAGTGAAGAAGGAATTGCTTTGTATTCATGGAGGATATTATAATTTTTCCAATTGCTCGTTTGAGAAATGGACCCTTGATTTTAAAGAATGTAATGTTAATGAAGAAAGTAGCAGTTATGTTGTCAAAGAAAAAGAATTATGGAGCTGA 486 0.3477 MIRNIANLVPMMKNGPSECNAALQFAVTTLQVENILVIGHSSCAGIEALMRMQEDTEPRNFIHNWVANGKVAKLKTKAATSHLSFDQQCRFCEKESINQSLLNLLSYPWIKDRVKKELLCIHGGYYNFSNCSFEKWTLDFKECNVNEESSSYVVKEKELWS 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03489 161 Pfam Carbonic anhydrase 2 130 IPR001765 GO:0004089|GO:0008270
Trre9g03489 161 PANTHER CARBONIC ANHYDRASE 1 149 IPR001765 GO:0004089|GO:0008270
Trre9g03489 161 SMART Pro_CA_2 1 137 IPR001765 GO:0004089|GO:0008270
Trre9g03489 161 Gene3D Carbonic anhydrase 1 147 IPR036874 GO:0004089|GO:0008270
Trre9g03489 161 SUPERFAMILY beta-carbonic anhydrase, cab 2 142 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03489 Trre-Chr9 43723300 43724711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03489 K01673 - gmx:100812124 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03489 9 43723300 43724711 Trre9g03489 9 43723300 43724711 ECH