Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre9g03478 | ATGGCTTCAATTTCAACCATTTATTCATCTTCACCAACACTCAACTATCAAAAAATTAATCAAAAAAACCAAAACGCATTTCCTAACTCAATACGACGTCGTTCCGATCTACCTATATACCAAACCCGACCTAAACTTTCCCCAACCCGCTCCGTCGCGCGTGAGGTTCCGACCGCCGTTTCAGCAACAAACAACCACCGTCTCGAGAAAGAGCCACGTGCGTTATGGACTCGTTACGTTGACTGGCTATACCAACACAAAGAAATCGGGTTGTATTTAGATGTGAGTCGGGTCGGGTTTACCGATGAGTTTGTGAAAGAAATGGAGCCACGACTTCAGGCGGCGTTAAAAGCTATGGTGGAGCTTGAAAAAGGTGCGATTGCGAATCCTGATGAAGGTCGTATGGTTGGACATTATTGGCTTAGGGATTCGAATCGTGCTCCTAATTCGTTTCTTAAGAATAAGATTGATACTACTCTTGATGCTATTTCTGCATTCGCTGATGATATCGTCTCTGGTAAGATTAAGCCTCCTTCATCGCCTGAGGGAAGGTTTACTCAAATACTTTCTGTTGGGATTGGAGGTTCTGCACTTGGACCACAGTTTGTTGCAGAGGCGCTTGCTCCTGATAATCCTCCACTCAAGATAAGATTTATTGACAACACAGATCCTGCTGGCATTGATCATCAGATTGCACAACTAGGCCCTGAGCTAGCTTCGACACTTGTAATCGTGATTTCAAAGAGTGGAGGTACTCCTGAGACTAGAAATGGCTTGTTAGAAGTGCAGAAGGCCTTTCGTGAAGCAGGATTGGATTTCCCAAAACAGGGTGTTGCTATAACACAAGAAAATTCTTTGTTGGATAATACTGCCAGAATTGAGGGATGGTTAGCTAGATTTCCCATGTTTGACTGGGTGGGAGGTAGAACGTCAGAGATGTCTGCAGTCGGCCTGCTTCCAGCAGCTCTGCAGACCATTGACATTAGGGAAATGCTTCATGGTGCATCACTGATGGATGAGGCAAATAGGAGTACTGTGATAAAGAACAATCCTGCTGCTTTGCTGGCTTTATGTTGGTATTGGGCTACAGATGGTGTAGGAAACAAGGATATGGTTATCCTTCCGTACAAGGACAGCCTGTTATTATTTAGTAGATACTTGCAGCAACTGGTCATGGAATCTCTGGGCAAGGAATATGACTTGGATGGTAATCGGGTTAATCAAGGAATTAGTGTTTATGGAAATAAAGGAAGCACGGATCAACATGCCTATATTCAGCAACTGAGGGAAGGTGTACACAATTTCTTTGCAACATTCATTGAGGTGCTCCGTGATAGACCACCTGGTCATGATTGGGAGCTTGAACCAGGTGTTACCAGTGGTGACTACCTGTTTGGTATGCTACAGGGAACAAGGTCAGCTTTGTATGCTAATGACCGCGAATCTATCACAGTCACTGTGCAAGAAGTGACACCTAGAGCTGTTGGAGCCCTTGTTGCACTGTATGAACGAGCAGTTGGGATATATGCCTCACTTGTCAACATAAATGCTTATCACCAGCCTGGTGTGGAAGCGGGTAAAAAAGCAGCAGGAGAAGTATTAGCACTTCAGAAGCGGGTGTTGGCAGTTCTAAATGAGGCAAGCTGCAAGGAGCCTGTTGAACCATTGACAATTGAAGAAGTAGCTGACCGTTGCCATGCTCCAGAAGATATTGAAGTAATTTACAAGATTATTGCTCATATGGCTGCAAATGACAGAGCACTAATTGCTGAAGGTAACTGTGGTTCTCCAAGGAGCGTCAAGGTTTTTCTGGGAGAGTGTAATGTTGATGAACTGTATGCATGA | 1845 | 0.4444 | MASISTIYSSSPTLNYQKINQKNQNAFPNSIRRRSDLPIYQTRPKLSPTRSVAREVPTAVSATNNHRLEKEPRALWTRYVDWLYQHKEIGLYLDVSRVGFTDEFVKEMEPRLQAALKAMVELEKGAIANPDEGRMVGHYWLRDSNRAPNSFLKNKIDTTLDAISAFADDIVSGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQTIDIREMLHGASLMDEANRSTVIKNNPAALLALCWYWATDGVGNKDMVILPYKDSLLLFSRYLQQLVMESLGKEYDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTSGDYLFGMLQGTRSALYANDRESITVTVQEVTPRAVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIEEVADRCHAPEDIEVIYKIIAHMAANDRALIAEGNCGSPRSVKVFLGECNVDELYA | 614 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre9g03478 | 614 | Pfam | Phosphoglucose isomerase | 112 | 444 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Trre9g03478 | 614 | Pfam | Phosphoglucose isomerase | 475 | 535 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Trre9g03478 | 614 | PRINTS | Glucose-6-phosphate isomerase signature | 188 | 207 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Trre9g03478 | 614 | PRINTS | Glucose-6-phosphate isomerase signature | 376 | 397 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Trre9g03478 | 614 | PRINTS | Glucose-6-phosphate isomerase signature | 496 | 510 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Trre9g03478 | 614 | PRINTS | Glucose-6-phosphate isomerase signature | 510 | 523 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Trre9g03478 | 614 | PRINTS | Glucose-6-phosphate isomerase signature | 478 | 496 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Trre9g03478 | 614 | PRINTS | Glucose-6-phosphate isomerase signature | 300 | 318 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Trre9g03478 | 614 | FunFam | Glucose-6-phosphate isomerase | 140 | 323 | - | - | |
| Trre9g03478 | 614 | Gene3D | - | 174 | 319 | - | - | |
| Trre9g03478 | 614 | MobiDBLite | consensus disorder prediction | 31 | 55 | - | - | |
| Trre9g03478 | 614 | SUPERFAMILY | SIS domain | 66 | 537 | IPR046348 | GO:0097367|GO:1901135 | |
| Trre9g03478 | 614 | Gene3D | - | 320 | 519 | - | - | |
| Trre9g03478 | 614 | PANTHER | GLUCOSE-6-PHOSPHATE ISOMERASE | 4 | 613 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Trre9g03478 | 614 | Hamap | Glucose-6-phosphate isomerase [pgi]. | 93 | 537 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Trre9g03478 | 614 | FunFam | Glucose-6-phosphate isomerase | 325 | 517 | - | - | |
| Trre9g03478 | 614 | ProSitePatterns | Phosphoglucose isomerase signature 2. | 510 | 527 | IPR018189 | GO:0004347|GO:0006094|GO:0006096 | |
| Trre9g03478 | 614 | CDD | SIS_PGI_1 | 159 | 323 | IPR035476 | - | |
| Trre9g03478 | 614 | CDD | SIS_PGI_2 | 369 | 533 | IPR035482 | - | |
| Trre9g03478 | 614 | ProSiteProfiles | Glucose-6-phosphate isomerase family profile. | 49 | 543 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trre9g03478 | Trre-Chr9 | 43603206 | 43613635 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre9g03478 | K01810 | - | gmx:100809452 | 1056.97 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Trre9g03478 | 9 | 43603206 | 43613635 | Trre9g03478 | 9 | 43603206 | 43613635 | ECH |