Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03208 ATGGCGAAACCAAACCCACACTGTATTCTCTCACTCACACTCTTCACTCTCTTCCTTTCATCCACAACAATCCTCTCCACAACACACGAACACCAAAACGACAACCCAATCACCCGTTTCCAACGCTATCTTCAAATCAACACAGCACACCCAACACCAGATTACACCACCGCCATATCATACCTCATTTCTCAAGCAAATTCAATCGGTGGAATCCTTCACAAAACCCTAGAATTCTCTCCAGGTAAACCTCTCCTCTTACTCACATGGCCTGGTTCCGATTCTTCTCTTCCTTCCATTCTCCTCAACTCTCATCTCGATTCCGTTCCTGCTGAATCCTCTAAATGGCTACATCCTCCTTTCTCCGCTACTCGAACTTCCGACGGCGATATCTTCGCTCGCGGTGCACAGGATGATAAATGTATTGCCATGCAGTATCTTGAAGCAATTCGTAATCTTCGTAATAACGGATTTGTTCCTGTTCGTTCTGTTCATATCTCGCTTGTTCCTGATGAGGAGATTGGTGGATTCGGTGGTGCGGCGAAGTTTGTTGATTCGGAGGAATTTAAAGAGCTTAATGTTGGATTTGCACTTGATGAAGGTCAGGCTTCACCTGGTGATGAATTTAGGGTTTTTTATTCGGATCGAATTCCGTGGAATTTGAAGATTAAGGCTATTGGAAGACCGGGTCATGGTTCGAGTTTGTATGATGGTAGTGCTATGGAGAGTTTGATGAAGAGTGTTGAAATTGTGAGTAGGTTTAGGGAGAGTCAGTTTGAAGTTGTTAAGGCTGGTAAAGCTTTGAATTCTGAGGTTGTTTCTGTTAATCCTGTTTATCTCAAAGCTGGTGTTGCCACTCAAGATGGGTTTGTGATGAATGTACAACCTTCGGAGGCGGAAGCTGGTTTTGATCTTAGGTTGACCCCTACGACGGACCCTGAGGAAATGAAGAGGAGAATTGCTACTGAGTGGGCACCATCTGTTAGAAATATGTCATATGAGATTACAGAGAAAGGACCCATCAGAGATTACTTGGGGCGTCCTTTAATGACCGCGACAAATGATTCCAATCCATGGTGGTTAGTTTTCAAGAAGGCTATAACCGCAACTGGAGAAAAACTTTCAAGGCCTGAAATTCTTGCATCCACGACAGATGCTCGATATATTAGACAGAAAGGGATTCCTGTACTTGGTTTTTCGCCAATGAAAAATACTCCCATCTTGCTTCATGAGCACAATGAGCATCTACGAGATACCGTGTACTTGAAGGGAATACAGGTATACGAGTCTTTGATAAGCTCCTTGAGTTTGTTTATACCGCGTAGCTGTAGGCACGTTCGTTGA 1344 0.439 MAKPNPHCILSLTLFTLFLSSTTILSTTHEHQNDNPITRFQRYLQINTAHPTPDYTTAISYLISQANSIGGILHKTLEFSPGKPLLLLTWPGSDSSLPSILLNSHLDSVPAESSKWLHPPFSATRTSDGDIFARGAQDDKCIAMQYLEAIRNLRNNGFVPVRSVHISLVPDEEIGGFGGAAKFVDSEEFKELNVGFALDEGQASPGDEFRVFYSDRIPWNLKIKAIGRPGHGSSLYDGSAMESLMKSVEIVSRFRESQFEVVKAGKALNSEVVSVNPVYLKAGVATQDGFVMNVQPSEAEAGFDLRLTPTTDPEEMKRRIATEWAPSVRNMSYEITEKGPIRDYLGRPLMTATNDSNPWWLVFKKAITATGEKLSRPEILASTTDARYIRQKGIPVLGFSPMKNTPILLHEHNEHLRDTVYLKGIQVYESLISSLSLFIPRSCRHVR 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03208 447 Pfam Peptidase family M20/M25/M40 101 433 IPR002933 GO:0016787
Trre9g03208 447 SUPERFAMILY Bacterial exopeptidase dimerisation domain 219 332 IPR036264 -
Trre9g03208 447 SUPERFAMILY Zn-dependent exopeptidases 29 435 - -
Trre9g03208 447 Gene3D - 221 328 - -
Trre9g03208 447 Gene3D Zn peptidases 26 220 - -
Trre9g03208 447 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 136 175 IPR001261 -
Trre9g03208 447 Gene3D - 357 437 - -
Trre9g03208 447 Pfam Peptidase dimerisation domain 220 322 IPR011650 -
Trre9g03208 447 FunFam Aminoacylase-1, putative 357 438 - -
Trre9g03208 447 FunFam aminoacylase-1 isoform X1 220 331 - -
Trre9g03208 447 PIRSF ACY-1 26 439 - -
Trre9g03208 447 PANTHER AMINOACYLASE-1 22 437 - -
Trre9g03208 447 FunFam Aminoacylase 1 28 220 - -
Trre9g03208 447 NCBIfam N-acyl-aliphatic-L-amino acid amidohydrolase 26 436 IPR010159 GO:0004046|GO:0005737|GO:0006520
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03208 Trre-Chr9 40796466 40803624 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03208 K14677 - gmx:100817383 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03208 9 40796466 40803624 Trre9g03208 9 40796466 40803624 ECH